Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CKS2P33552 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CKS2P33552 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CKS2P33552 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.13■□□□□ 0.01
CKS2P33552 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 AC133637.1-201ENST00000624115 1537 ntBASIC15.12■□□□□ 0.01
CKS2P33552 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
CKS2P33552 AL512408.1-201ENST00000569378 2000 ntBASIC15.12■□□□□ 0.01
CKS2P33552 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CKS2P33552 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.12■□□□□ 0.01
CKS2P33552 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.12■□□□□ 0.01
CKS2P33552 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.12■□□□□ 0.01
CKS2P33552 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CKS2P33552 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.12■□□□□ 0.01
CKS2P33552 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CKS2P33552 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CKS2P33552 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CKS2P33552 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CKS2P33552 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.12■□□□□ 0.01
CKS2P33552 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.12■□□□□ 0.01
CKS2P33552 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CKS2P33552 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.11■□□□□ 0.01
CKS2P33552 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKS2P33552 AL162377.1-201ENST00000618844 1793 ntBASIC15.11■□□□□ 0.01
CKS2P33552 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKS2P33552 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CKS2P33552 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CKS2P33552 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CKS2P33552 AL451085.2-201ENST00000605085 799 ntBASIC15.11■□□□□ 0.01
CKS2P33552 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.11■□□□□ 0.01
CKS2P33552 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC15.11■□□□□ 0.01
CKS2P33552 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKS2P33552 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKS2P33552 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKS2P33552 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.11■□□□□ 0.01
CKS2P33552 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CKS2P33552 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKS2P33552 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKS2P33552 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CKS2P33552 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.11■□□□□ 0.01
CKS2P33552 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKS2P33552 BX323043.1-201ENST00000641006 1765 ntBASIC15.11■□□□□ 0.01
CKS2P33552 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CKS2P33552 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CKS2P33552 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.1■□□□□ 0.01
CKS2P33552 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.1■□□□□ 0.01
CKS2P33552 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKS2P33552 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.1■□□□□ 0.01
CKS2P33552 AP004607.7-201ENST00000527152 1677 ntBASIC15.1■□□□□ 0.01
CKS2P33552 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CKS2P33552 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKS2P33552 AC099778.1-201ENST00000568593 1911 ntBASIC15.1■□□□□ 0.01
CKS2P33552 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKS2P33552 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKS2P33552 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKS2P33552 ATP5G2P3-201ENST00000429083 425 ntBASIC15.1■□□□□ 0.01
CKS2P33552 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC15.1■□□□□ 0.01
CKS2P33552 Z92544.1-202ENST00000571933 1220 ntBASIC15.1■□□□□ 0.01
CKS2P33552 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.1■□□□□ 0.01
CKS2P33552 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKS2P33552 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CKS2P33552 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKS2P33552 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKS2P33552 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CKS2P33552 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.1■□□□□ 0.01
CKS2P33552 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CKS2P33552 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CKS2P33552 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.1■□□□□ 0.01
CKS2P33552 AC021242.3-201ENST00000607598 1377 ntBASIC15.1■□□□□ 0.01
CKS2P33552 FP700111.2-201ENST00000619190 1892 ntBASIC15.1■□□□□ 0.01
CKS2P33552 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS2P33552 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CKS2P33552 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CKS2P33552 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.09■□□□□ 0.01
CKS2P33552 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms