Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.19■□□□□ 0.98
SLC6A4P31645 KRT18P6-201ENST00000555540 1265 ntBASIC21.19■□□□□ 0.98
SLC6A4P31645 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SLC6A4P31645 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC6A4P31645 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.19■□□□□ 0.98
SLC6A4P31645 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.19■□□□□ 0.98
SLC6A4P31645 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.19■□□□□ 0.98
SLC6A4P31645 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.19■□□□□ 0.98
SLC6A4P31645 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SLC6A4P31645 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.18■□□□□ 0.98
SLC6A4P31645 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A4P31645 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A4P31645 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A4P31645 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A4P31645 KRT18P68-201ENST00000392293 1000 ntBASIC21.18■□□□□ 0.98
SLC6A4P31645 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.18■□□□□ 0.98
SLC6A4P31645 AC091874.3-201ENST00000512672 1195 ntBASIC21.18■□□□□ 0.98
SLC6A4P31645 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.18■□□□□ 0.98
SLC6A4P31645 AC083880.1-201ENST00000608266 535 ntBASIC21.18■□□□□ 0.98
SLC6A4P31645 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.18■□□□□ 0.98
SLC6A4P31645 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SLC6A4P31645 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A4P31645 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A4P31645 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A4P31645 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC6A4P31645 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.17■□□□□ 0.98
SLC6A4P31645 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC6A4P31645 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC6A4P31645 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC6A4P31645 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC6A4P31645 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC6A4P31645 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.17■□□□□ 0.98
SLC6A4P31645 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SLC6A4P31645 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC6A4P31645 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC6A4P31645 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC6A4P31645 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC6A4P31645 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC6A4P31645 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC6A4P31645 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A4P31645 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A4P31645 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A4P31645 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A4P31645 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SLC6A4P31645 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.16■□□□□ 0.98
SLC6A4P31645 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC6A4P31645 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC6A4P31645 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A4P31645 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A4P31645 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SLC6A4P31645 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.16■□□□□ 0.98
SLC6A4P31645 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
SLC6A4P31645 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC6A4P31645 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC6A4P31645 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.16■□□□□ 0.98
SLC6A4P31645 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A4P31645 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A4P31645 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.15■□□□□ 0.98
SLC6A4P31645 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC6A4P31645 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.15■□□□□ 0.98
SLC6A4P31645 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A4P31645 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A4P31645 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A4P31645 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A4P31645 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SLC6A4P31645 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC6A4P31645 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A4P31645 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC6A4P31645 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.15■□□□□ 0.98
SLC6A4P31645 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC6A4P31645 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A4P31645 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A4P31645 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A4P31645 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A4P31645 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC6A4P31645 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC6A4P31645 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC6A4P31645 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
SLC6A4P31645 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
SLC6A4P31645 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SLC6A4P31645 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SLC6A4P31645 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A4P31645 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A4P31645 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SLC6A4P31645 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.14■□□□□ 0.97
SLC6A4P31645 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SLC6A4P31645 AC097658.1-201ENST00000475555 843 ntBASIC21.14■□□□□ 0.97
SLC6A4P31645 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.14■□□□□ 0.97
SLC6A4P31645 CD99P1-205ENST00000527459 561 ntBASIC21.14■□□□□ 0.97
SLC6A4P31645 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.14■□□□□ 0.97
SLC6A4P31645 AL589743.5-201ENST00000616611 1050 ntBASIC21.14■□□□□ 0.97
SLC6A4P31645 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A4P31645 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC6A4P31645 AC121338.2-201ENST00000622535 1744 ntBASIC21.14■□□□□ 0.97
SLC6A4P31645 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SLC6A4P31645 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC6A4P31645 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A4P31645 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SLC6A4P31645 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A4P31645 AC087633.2-202ENST00000565166 1439 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms