Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD40P25942 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CD40P25942 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CD40P25942 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD40P25942 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.77■□□□□ 0.44
CD40P25942 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.77■□□□□ 0.44
CD40P25942 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CD40P25942 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CD40P25942 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD40P25942 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD40P25942 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD40P25942 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD40P25942 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD40P25942 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.77■□□□□ 0.44
CD40P25942 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.77■□□□□ 0.44
CD40P25942 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.77■□□□□ 0.44
CD40P25942 FAM201B-201ENST00000458407 597 ntBASIC17.77■□□□□ 0.44
CD40P25942 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.77■□□□□ 0.44
CD40P25942 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CD40P25942 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.77■□□□□ 0.44
CD40P25942 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD40P25942 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD40P25942 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD40P25942 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CD40P25942 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.77■□□□□ 0.43
CD40P25942 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.76■□□□□ 0.43
CD40P25942 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD40P25942 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.76■□□□□ 0.43
CD40P25942 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD40P25942 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD40P25942 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD40P25942 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD40P25942 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CD40P25942 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.76■□□□□ 0.43
CD40P25942 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD40P25942 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD40P25942 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CD40P25942 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CD40P25942 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD40P25942 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD40P25942 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.76■□□□□ 0.43
CD40P25942 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CD40P25942 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD40P25942 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.75■□□□□ 0.43
CD40P25942 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CD40P25942 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.75■□□□□ 0.43
CD40P25942 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.75■□□□□ 0.43
CD40P25942 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD40P25942 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD40P25942 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD40P25942 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CD40P25942 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.75■□□□□ 0.43
CD40P25942 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.75■□□□□ 0.43
CD40P25942 TMEM191A-211ENST00000637163 1067 ntBASIC17.75■□□□□ 0.43
CD40P25942 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD40P25942 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD40P25942 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.75■□□□□ 0.43
CD40P25942 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CD40P25942 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CD40P25942 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.75■□□□□ 0.43
CD40P25942 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.75■□□□□ 0.43
CD40P25942 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD40P25942 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CD40P25942 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD40P25942 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD40P25942 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CD40P25942 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD40P25942 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CD40P25942 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD40P25942 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD40P25942 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD40P25942 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD40P25942 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD40P25942 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.74■□□□□ 0.43
CD40P25942 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD40P25942 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD40P25942 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CD40P25942 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.74■□□□□ 0.43
CD40P25942 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD40P25942 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.74■□□□□ 0.43
CD40P25942 AC105020.6-201ENST00000621523 1217 ntBASIC17.74■□□□□ 0.43
CD40P25942 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.74■□□□□ 0.43
CD40P25942 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CD40P25942 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CD40P25942 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD40P25942 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD40P25942 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD40P25942 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CD40P25942 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD40P25942 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD40P25942 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD40P25942 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.73■□□□□ 0.43
CD40P25942 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD40P25942 AC087633.2-202ENST00000565166 1439 ntBASIC17.73■□□□□ 0.43
CD40P25942 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CD40P25942 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CD40P25942 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.73■□□□□ 0.43
CD40P25942 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CD40P25942 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CD40P25942 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms