Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.3■□□□□ 0.84
LAMA1P25391 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.3■□□□□ 0.84
LAMA1P25391 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LAMA1P25391 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LAMA1P25391 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.3■□□□□ 0.84
LAMA1P25391 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.3■□□□□ 0.84
LAMA1P25391 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.3■□□□□ 0.84
LAMA1P25391 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.3■□□□□ 0.84
LAMA1P25391 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LAMA1P25391 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LAMA1P25391 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMA1P25391 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.29■□□□□ 0.84
LAMA1P25391 AL135905.2-201ENST00000584934 1404 ntBASIC20.29■□□□□ 0.84
LAMA1P25391 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
LAMA1P25391 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMA1P25391 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.29■□□□□ 0.84
LAMA1P25391 AC133681.1-201ENST00000465482 601 ntBASIC20.29■□□□□ 0.84
LAMA1P25391 AP003071.4-201ENST00000562276 1284 ntBASIC20.29■□□□□ 0.84
LAMA1P25391 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.29■□□□□ 0.84
LAMA1P25391 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.29■□□□□ 0.84
LAMA1P25391 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LAMA1P25391 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LAMA1P25391 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
LAMA1P25391 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMA1P25391 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMA1P25391 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMA1P25391 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMA1P25391 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMA1P25391 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.29■□□□□ 0.84
LAMA1P25391 FAM21FP-204ENST00000608637 956 ntBASIC20.29■□□□□ 0.84
LAMA1P25391 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.29■□□□□ 0.84
LAMA1P25391 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LAMA1P25391 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMA1P25391 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LAMA1P25391 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LAMA1P25391 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LAMA1P25391 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.28■□□□□ 0.84
LAMA1P25391 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.28■□□□□ 0.84
LAMA1P25391 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.28■□□□□ 0.84
LAMA1P25391 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.28■□□□□ 0.84
LAMA1P25391 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.28■□□□□ 0.84
LAMA1P25391 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.28■□□□□ 0.84
LAMA1P25391 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.28■□□□□ 0.84
LAMA1P25391 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMA1P25391 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMA1P25391 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LAMA1P25391 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LAMA1P25391 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMA1P25391 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMA1P25391 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LAMA1P25391 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMA1P25391 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LAMA1P25391 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LAMA1P25391 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LAMA1P25391 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
LAMA1P25391 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LAMA1P25391 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LAMA1P25391 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LAMA1P25391 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
LAMA1P25391 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LAMA1P25391 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LAMA1P25391 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LAMA1P25391 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
LAMA1P25391 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LAMA1P25391 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LAMA1P25391 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
LAMA1P25391 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LAMA1P25391 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.27■□□□□ 0.84
LAMA1P25391 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LAMA1P25391 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LAMA1P25391 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LAMA1P25391 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.27■□□□□ 0.84
LAMA1P25391 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LAMA1P25391 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.27■□□□□ 0.84
LAMA1P25391 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LAMA1P25391 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.27■□□□□ 0.83
LAMA1P25391 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LAMA1P25391 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LAMA1P25391 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
LAMA1P25391 ARMC10P1-201ENST00000313754 855 ntBASIC20.26■□□□□ 0.83
LAMA1P25391 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LAMA1P25391 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LAMA1P25391 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LAMA1P25391 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LAMA1P25391 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
LAMA1P25391 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.26■□□□□ 0.83
LAMA1P25391 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.26■□□□□ 0.83
LAMA1P25391 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LAMA1P25391 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.26■□□□□ 0.83
LAMA1P25391 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LAMA1P25391 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.26■□□□□ 0.83
LAMA1P25391 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LAMA1P25391 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.26■□□□□ 0.83
LAMA1P25391 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.26■□□□□ 0.83
LAMA1P25391 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.26■□□□□ 0.83
LAMA1P25391 AC105020.6-201ENST00000621523 1217 ntBASIC20.26■□□□□ 0.83
LAMA1P25391 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LAMA1P25391 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LAMA1P25391 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LAMA1P25391 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms