Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MRPL3P09001 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.43■□□□□ 0.54
MRPL3P09001 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.43■□□□□ 0.54
MRPL3P09001 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.43■□□□□ 0.54
MRPL3P09001 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.43■□□□□ 0.54
MRPL3P09001 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.43■□□□□ 0.54
MRPL3P09001 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MRPL3P09001 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MRPL3P09001 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.43■□□□□ 0.54
MRPL3P09001 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MRPL3P09001 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.43■□□□□ 0.54
MRPL3P09001 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MRPL3P09001 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MRPL3P09001 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.43■□□□□ 0.54
MRPL3P09001 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.42■□□□□ 0.54
MRPL3P09001 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.42■□□□□ 0.54
MRPL3P09001 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.42■□□□□ 0.54
MRPL3P09001 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.42■□□□□ 0.54
MRPL3P09001 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.42■□□□□ 0.54
MRPL3P09001 AC007952.6-201ENST00000573168 2673 ntBASIC18.42■□□□□ 0.54
MRPL3P09001 AC003957.1-201ENST00000625108 2673 ntBASIC18.42■□□□□ 0.54
MRPL3P09001 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRPL3P09001 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.42■□□□□ 0.54
MRPL3P09001 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRPL3P09001 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRPL3P09001 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MRPL3P09001 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
MRPL3P09001 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRPL3P09001 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRPL3P09001 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.42■□□□□ 0.54
MRPL3P09001 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.42■□□□□ 0.54
MRPL3P09001 AC027682.1-201ENST00000562846 899 ntBASIC18.42■□□□□ 0.54
MRPL3P09001 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.42■□□□□ 0.54
MRPL3P09001 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
MRPL3P09001 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.42■□□□□ 0.54
MRPL3P09001 AC131212.1-201ENST00000613771 668 ntBASIC18.42■□□□□ 0.54
MRPL3P09001 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.42■□□□□ 0.54
MRPL3P09001 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
MRPL3P09001 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MRPL3P09001 AC061975.6-201ENST00000579045 1553 ntBASIC18.42■□□□□ 0.54
MRPL3P09001 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
MRPL3P09001 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL3P09001 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL3P09001 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.41■□□□□ 0.54
MRPL3P09001 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
MRPL3P09001 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL3P09001 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL3P09001 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL3P09001 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL3P09001 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL3P09001 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL3P09001 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL3P09001 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.41■□□□□ 0.54
MRPL3P09001 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.41■□□□□ 0.54
MRPL3P09001 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.41■□□□□ 0.54
MRPL3P09001 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.41■□□□□ 0.54
MRPL3P09001 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MRPL3P09001 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL3P09001 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL3P09001 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL3P09001 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.41■□□□□ 0.54
MRPL3P09001 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.41■□□□□ 0.54
MRPL3P09001 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL3P09001 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.41■□□□□ 0.54
MRPL3P09001 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MRPL3P09001 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MRPL3P09001 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MRPL3P09001 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
MRPL3P09001 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL3P09001 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL3P09001 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.4■□□□□ 0.54
MRPL3P09001 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.4■□□□□ 0.54
MRPL3P09001 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL3P09001 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MRPL3P09001 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL3P09001 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL3P09001 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL3P09001 AC096631.2-201ENST00000436136 790 ntBASIC18.4■□□□□ 0.54
MRPL3P09001 PBX2P1-201ENST00000493219 1291 ntBASIC18.4■□□□□ 0.54
MRPL3P09001 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.4■□□□□ 0.54
MRPL3P09001 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.4■□□□□ 0.54
MRPL3P09001 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL3P09001 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.4■□□□□ 0.54
MRPL3P09001 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL3P09001 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL3P09001 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL3P09001 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MRPL3P09001 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.4■□□□□ 0.54
MRPL3P09001 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
MRPL3P09001 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MRPL3P09001 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MRPL3P09001 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
MRPL3P09001 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.39■□□□□ 0.53
MRPL3P09001 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MRPL3P09001 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.39■□□□□ 0.53
MRPL3P09001 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MRPL3P09001 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MRPL3P09001 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.39■□□□□ 0.53
MRPL3P09001 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MRPL3P09001 AC011484.1-201ENST00000377652 1995 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms