Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CAPN1P07384 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN1P07384 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN1P07384 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CAPN1P07384 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN1P07384 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN1P07384 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN1P07384 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN1P07384 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.19■□□□□ 0.82
CAPN1P07384 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN1P07384 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.19■□□□□ 0.82
CAPN1P07384 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN1P07384 EEF1DP3-203ENST00000566025 782 ntBASIC20.19■□□□□ 0.82
CAPN1P07384 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN1P07384 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.19■□□□□ 0.82
CAPN1P07384 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.19■□□□□ 0.82
CAPN1P07384 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN1P07384 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN1P07384 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN1P07384 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN1P07384 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.19■□□□□ 0.82
CAPN1P07384 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN1P07384 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.19■□□□□ 0.82
CAPN1P07384 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN1P07384 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN1P07384 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CAPN1P07384 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.18■□□□□ 0.82
CAPN1P07384 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN1P07384 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CAPN1P07384 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
CAPN1P07384 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN1P07384 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN1P07384 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.18■□□□□ 0.82
CAPN1P07384 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.18■□□□□ 0.82
CAPN1P07384 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.18■□□□□ 0.82
CAPN1P07384 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.18■□□□□ 0.82
CAPN1P07384 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN1P07384 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.18■□□□□ 0.82
CAPN1P07384 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN1P07384 AC121338.2-201ENST00000622535 1744 ntBASIC20.18■□□□□ 0.82
CAPN1P07384 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN1P07384 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN1P07384 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN1P07384 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN1P07384 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CAPN1P07384 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CAPN1P07384 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.17■□□□□ 0.82
CAPN1P07384 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN1P07384 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN1P07384 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN1P07384 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN1P07384 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.17■□□□□ 0.82
CAPN1P07384 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.17■□□□□ 0.82
CAPN1P07384 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.17■□□□□ 0.82
CAPN1P07384 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.17■□□□□ 0.82
CAPN1P07384 AP001160.3-201ENST00000601484 763 ntBASIC20.17■□□□□ 0.82
CAPN1P07384 AC053503.5-201ENST00000601508 636 ntBASIC20.17■□□□□ 0.82
CAPN1P07384 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN1P07384 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN1P07384 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN1P07384 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
CAPN1P07384 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.17■□□□□ 0.82
CAPN1P07384 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CAPN1P07384 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.17■□□□□ 0.82
CAPN1P07384 RNF165-205ENST00000588679 2904 ntBASIC20.16■□□□□ 0.82
CAPN1P07384 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN1P07384 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN1P07384 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CAPN1P07384 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN1P07384 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CAPN1P07384 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN1P07384 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.16■□□□□ 0.82
CAPN1P07384 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.16■□□□□ 0.82
CAPN1P07384 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.16■□□□□ 0.82
CAPN1P07384 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.16■□□□□ 0.82
CAPN1P07384 UBE2DNL-204ENST00000602536 740 ntBASIC20.16■□□□□ 0.82
CAPN1P07384 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.16■□□□□ 0.82
CAPN1P07384 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN1P07384 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN1P07384 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.16■□□□□ 0.82
CAPN1P07384 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN1P07384 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CAPN1P07384 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
CAPN1P07384 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN1P07384 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN1P07384 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN1P07384 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.15■□□□□ 0.82
CAPN1P07384 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CAPN1P07384 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN1P07384 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.15■□□□□ 0.82
CAPN1P07384 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.15■□□□□ 0.82
CAPN1P07384 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CAPN1P07384 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.15■□□□□ 0.82
CAPN1P07384 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN1P07384 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN1P07384 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.15■□□□□ 0.82
CAPN1P07384 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN1P07384 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CAPN1P07384 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CAPN1P07384 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms