Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
PCF11O94913 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
PCF11O94913 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC32.33■■■□□ 2.77
PCF11O94913 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC32.33■■■□□ 2.77
PCF11O94913 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC32.33■■■□□ 2.77
PCF11O94913 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC32.33■■■□□ 2.77
PCF11O94913 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC32.33■■■□□ 2.77
PCF11O94913 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC32.33■■■□□ 2.77
PCF11O94913 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
PCF11O94913 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC32.33■■■□□ 2.77
PCF11O94913 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
PCF11O94913 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
PCF11O94913 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC32.32■■■□□ 2.77
PCF11O94913 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.77
PCF11O94913 PALM-207ENST00000590161 2137 ntTSL 4 BASIC32.32■■■□□ 2.77
PCF11O94913 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC32.32■■■□□ 2.76
PCF11O94913 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
PCF11O94913 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
PCF11O94913 PEX7-202ENST00000367756 680 ntTSL 3 BASIC32.32■■■□□ 2.76
PCF11O94913 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC32.32■■■□□ 2.76
PCF11O94913 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC32.32■■■□□ 2.76
PCF11O94913 OR2A1-AS1-207ENST00000486094 819 ntBASIC32.32■■■□□ 2.76
PCF11O94913 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC32.32■■■□□ 2.76
PCF11O94913 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
PCF11O94913 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC32.31■■■□□ 2.76
PCF11O94913 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC32.31■■■□□ 2.76
PCF11O94913 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
PCF11O94913 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
PCF11O94913 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PCF11O94913 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC32.3■■■□□ 2.76
PCF11O94913 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
PCF11O94913 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PCF11O94913 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PCF11O94913 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC32.3■■■□□ 2.76
PCF11O94913 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PCF11O94913 TUB-203ENST00000534099 1759 ntTSL 2 BASIC32.3■■■□□ 2.76
PCF11O94913 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
PCF11O94913 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC32.29■■■□□ 2.76
PCF11O94913 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
PCF11O94913 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
PCF11O94913 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
PCF11O94913 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
PCF11O94913 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
PCF11O94913 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC32.29■■■□□ 2.76
PCF11O94913 SERP1-205ENST00000487153 657 ntTSL 4 BASIC32.29■■■□□ 2.76
PCF11O94913 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC32.29■■■□□ 2.76
PCF11O94913 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
PCF11O94913 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC32.29■■■□□ 2.76
PCF11O94913 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC32.29■■■□□ 2.76
PCF11O94913 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC32.29■■■□□ 2.76
PCF11O94913 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
PCF11O94913 GXYLT1P3-201ENST00000453058 1193 ntBASIC32.28■■■□□ 2.76
PCF11O94913 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PCF11O94913 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC32.28■■■□□ 2.76
PCF11O94913 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
PCF11O94913 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
PCF11O94913 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PCF11O94913 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
PCF11O94913 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PCF11O94913 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PCF11O94913 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
PCF11O94913 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
PCF11O94913 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC32.28■■■□□ 2.76
PCF11O94913 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
PCF11O94913 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC32.28■■■□□ 2.76
PCF11O94913 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
PCF11O94913 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC32.27■■■□□ 2.76
PCF11O94913 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PCF11O94913 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC32.27■■■□□ 2.76
PCF11O94913 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC32.27■■■□□ 2.76
PCF11O94913 POM121L13P-201ENST00000422362 380 ntBASIC32.27■■■□□ 2.76
PCF11O94913 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC32.27■■■□□ 2.76
PCF11O94913 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC32.27■■■□□ 2.76
PCF11O94913 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC32.27■■■□□ 2.76
PCF11O94913 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
PCF11O94913 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
PCF11O94913 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC32.26■■■□□ 2.76
PCF11O94913 PARN-205ENST00000539279 1557 ntTSL 2 BASIC32.26■■■□□ 2.76
PCF11O94913 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.75
PCF11O94913 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
PCF11O94913 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.75
PCF11O94913 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
PCF11O94913 MOK-233ENST00000524214 1539 ntTSL 2 BASIC32.26■■■□□ 2.75
PCF11O94913 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
PCF11O94913 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
PCF11O94913 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
PCF11O94913 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC32.25■■■□□ 2.75
PCF11O94913 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
PCF11O94913 C1QBPP2-201ENST00000528754 825 ntBASIC32.25■■■□□ 2.75
PCF11O94913 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC32.25■■■□□ 2.75
PCF11O94913 LINC01023-201ENST00000606054 436 ntBASIC32.25■■■□□ 2.75
PCF11O94913 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC32.25■■■□□ 2.75
PCF11O94913 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
PCF11O94913 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC32.25■■■□□ 2.75
PCF11O94913 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
PCF11O94913 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC32.24■■■□□ 2.75
PCF11O94913 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC32.24■■■□□ 2.75
PCF11O94913 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC32.24■■■□□ 2.75
PCF11O94913 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
PCF11O94913 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms