Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
USP1O94782 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.77■□□□□ 0.91
USP1O94782 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP1O94782 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP1O94782 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.76■□□□□ 0.91
USP1O94782 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
USP1O94782 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP1O94782 TERF1P2-201ENST00000583350 1212 ntBASIC20.76■□□□□ 0.91
USP1O94782 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP1O94782 MIR5787-201ENST00000611784 55 ntBASIC20.76■□□□□ 0.91
USP1O94782 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP1O94782 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
USP1O94782 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP1O94782 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.76■□□□□ 0.91
USP1O94782 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP1O94782 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP1O94782 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP1O94782 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.75■□□□□ 0.91
USP1O94782 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP1O94782 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
USP1O94782 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP1O94782 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP1O94782 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP1O94782 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP1O94782 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP1O94782 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.75■□□□□ 0.91
USP1O94782 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.75■□□□□ 0.91
USP1O94782 YBX1P1-201ENST00000445822 960 ntBASIC20.75■□□□□ 0.91
USP1O94782 AC245052.3-201ENST00000450182 901 ntBASIC20.75■□□□□ 0.91
USP1O94782 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.75■□□□□ 0.91
USP1O94782 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP1O94782 DUX4L2-201ENST00000561772 1275 ntBASIC20.75■□□□□ 0.91
USP1O94782 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.75■□□□□ 0.91
USP1O94782 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
USP1O94782 DUX4L6-201ENST00000626483 1275 ntBASIC20.75■□□□□ 0.91
USP1O94782 DUX4L1-201ENST00000627662 1275 ntBASIC20.75■□□□□ 0.91
USP1O94782 DUX4L8-201ENST00000629013 1275 ntBASIC20.75■□□□□ 0.91
USP1O94782 DUX4L3-201ENST00000630187 1275 ntBASIC20.75■□□□□ 0.91
USP1O94782 DUX4L7-201ENST00000630678 1275 ntBASIC20.75■□□□□ 0.91
USP1O94782 DUX4L5-201ENST00000630834 1275 ntBASIC20.75■□□□□ 0.91
USP1O94782 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP1O94782 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP1O94782 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP1O94782 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP1O94782 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.75■□□□□ 0.91
USP1O94782 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.75■□□□□ 0.91
USP1O94782 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
USP1O94782 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.75■□□□□ 0.91
USP1O94782 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.75■□□□□ 0.91
USP1O94782 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP1O94782 AC020907.5-201ENST00000624372 1936 ntBASIC20.74■□□□□ 0.91
USP1O94782 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
USP1O94782 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP1O94782 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP1O94782 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
USP1O94782 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.74■□□□□ 0.91
USP1O94782 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
USP1O94782 AC104187.1-201ENST00000607510 612 ntBASIC20.74■□□□□ 0.91
USP1O94782 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP1O94782 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
USP1O94782 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
USP1O94782 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP1O94782 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP1O94782 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP1O94782 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
USP1O94782 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP1O94782 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP1O94782 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.73■□□□□ 0.91
USP1O94782 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.73■□□□□ 0.91
USP1O94782 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
USP1O94782 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP1O94782 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.73■□□□□ 0.91
USP1O94782 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP1O94782 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
USP1O94782 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP1O94782 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP1O94782 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP1O94782 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP1O94782 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP1O94782 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
USP1O94782 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP1O94782 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
USP1O94782 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP1O94782 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.73■□□□□ 0.91
USP1O94782 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.72■□□□□ 0.91
USP1O94782 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
USP1O94782 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP1O94782 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP1O94782 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP1O94782 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP1O94782 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP1O94782 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
USP1O94782 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP1O94782 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.72■□□□□ 0.91
USP1O94782 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP1O94782 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP1O94782 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.72■□□□□ 0.91
USP1O94782 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.72■□□□□ 0.91
USP1O94782 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.72■□□□□ 0.91
USP1O94782 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms