Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF254O75437 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ZNF254O75437 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF254O75437 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF254O75437 POU5F1P4-201ENST00000413175 1085 ntBASIC18.19■□□□□ 0.5
ZNF254O75437 TPRG1LP1-201ENST00000598702 760 ntBASIC18.19■□□□□ 0.5
ZNF254O75437 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF254O75437 AC008175.2-201ENST00000612840 297 ntBASIC18.19■□□□□ 0.5
ZNF254O75437 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF254O75437 AL358852.1-201ENST00000623174 1268 ntBASIC18.19■□□□□ 0.5
ZNF254O75437 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
ZNF254O75437 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ZNF254O75437 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ZNF254O75437 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF254O75437 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF254O75437 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF254O75437 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF254O75437 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNF254O75437 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
ZNF254O75437 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 AC020907.5-201ENST00000624372 1936 ntBASIC18.18■□□□□ 0.5
ZNF254O75437 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNF254O75437 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNF254O75437 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ZNF254O75437 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ZNF254O75437 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNF254O75437 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNF254O75437 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ZNF254O75437 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF254O75437 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.17■□□□□ 0.5
ZNF254O75437 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF254O75437 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF254O75437 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ZNF254O75437 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ZNF254O75437 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF254O75437 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF254O75437 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ZNF254O75437 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
ZNF254O75437 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.17■□□□□ 0.5
ZNF254O75437 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF254O75437 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF254O75437 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF254O75437 SUDS3P1-201ENST00000505831 966 ntBASIC18.17■□□□□ 0.5
ZNF254O75437 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF254O75437 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF254O75437 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.17■□□□□ 0.5
ZNF254O75437 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNF254O75437 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ZNF254O75437 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.17■□□□□ 0.5
ZNF254O75437 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF254O75437 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF254O75437 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF254O75437 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
ZNF254O75437 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF254O75437 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF254O75437 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNF254O75437 AC061975.6-201ENST00000579045 1553 ntBASIC18.17■□□□□ 0.5
ZNF254O75437 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF254O75437 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF254O75437 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF254O75437 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF254O75437 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNF254O75437 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.16■□□□□ 0.5
ZNF254O75437 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNF254O75437 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNF254O75437 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF254O75437 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF254O75437 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF254O75437 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF254O75437 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNF254O75437 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ZNF254O75437 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF254O75437 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF254O75437 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
ZNF254O75437 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
ZNF254O75437 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF254O75437 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF254O75437 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF254O75437 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF254O75437 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF254O75437 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNF254O75437 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNF254O75437 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.15■□□□□ 0.5
ZNF254O75437 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms