Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.71■□□□□ 0.75
CPNE3O75131 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
CPNE3O75131 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.71■□□□□ 0.75
CPNE3O75131 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.71■□□□□ 0.75
CPNE3O75131 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CPNE3O75131 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE3O75131 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE3O75131 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE3O75131 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CPNE3O75131 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.7■□□□□ 0.74
CPNE3O75131 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.7■□□□□ 0.74
CPNE3O75131 AC091874.3-201ENST00000512672 1195 ntBASIC19.7■□□□□ 0.74
CPNE3O75131 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.7■□□□□ 0.74
CPNE3O75131 MYC-209ENST00000641252 345 ntBASIC19.7■□□□□ 0.74
CPNE3O75131 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE3O75131 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE3O75131 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE3O75131 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CPNE3O75131 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.7■□□□□ 0.74
CPNE3O75131 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE3O75131 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CPNE3O75131 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE3O75131 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE3O75131 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CPNE3O75131 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE3O75131 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE3O75131 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.69■□□□□ 0.74
CPNE3O75131 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE3O75131 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE3O75131 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CPNE3O75131 LSM12P1-201ENST00000411836 588 ntBASIC19.69■□□□□ 0.74
CPNE3O75131 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.69■□□□□ 0.74
CPNE3O75131 DUSP5P2-201ENST00000426873 1033 ntBASIC19.69■□□□□ 0.74
CPNE3O75131 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.69■□□□□ 0.74
CPNE3O75131 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.69■□□□□ 0.74
CPNE3O75131 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.69■□□□□ 0.74
CPNE3O75131 AC083880.1-201ENST00000608266 535 ntBASIC19.69■□□□□ 0.74
CPNE3O75131 AC100791.3-201ENST00000617619 330 ntBASIC19.69■□□□□ 0.74
CPNE3O75131 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE3O75131 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE3O75131 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE3O75131 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CPNE3O75131 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPNE3O75131 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE3O75131 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CPNE3O75131 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CPNE3O75131 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE3O75131 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CPNE3O75131 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE3O75131 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE3O75131 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CPNE3O75131 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.68■□□□□ 0.74
CPNE3O75131 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE3O75131 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CPNE3O75131 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CPNE3O75131 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE3O75131 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE3O75131 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE3O75131 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE3O75131 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPNE3O75131 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE3O75131 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.67■□□□□ 0.74
CPNE3O75131 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE3O75131 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE3O75131 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.67■□□□□ 0.74
CPNE3O75131 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE3O75131 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CPNE3O75131 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CPNE3O75131 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE3O75131 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE3O75131 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE3O75131 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE3O75131 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE3O75131 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE3O75131 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.67■□□□□ 0.74
CPNE3O75131 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.67■□□□□ 0.74
CPNE3O75131 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.67■□□□□ 0.74
CPNE3O75131 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CPNE3O75131 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPNE3O75131 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CPNE3O75131 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE3O75131 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.66■□□□□ 0.74
CPNE3O75131 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE3O75131 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE3O75131 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CPNE3O75131 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE3O75131 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CPNE3O75131 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE3O75131 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CPNE3O75131 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.66■□□□□ 0.74
CPNE3O75131 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE3O75131 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE3O75131 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE3O75131 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.66■□□□□ 0.74
CPNE3O75131 POU5F1P3-201ENST00000428824 1078 ntBASIC19.66■□□□□ 0.74
CPNE3O75131 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.66■□□□□ 0.74
CPNE3O75131 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE3O75131 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE3O75131 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.66■□□□□ 0.74
CPNE3O75131 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms