Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC28.09■■■□□ 2.09
PER1O15534 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC28.09■■■□□ 2.09
PER1O15534 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
PER1O15534 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
PER1O15534 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC28.08■■■□□ 2.09
PER1O15534 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC28.08■■■□□ 2.09
PER1O15534 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PER1O15534 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC28.08■■■□□ 2.09
PER1O15534 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC28.08■■■□□ 2.09
PER1O15534 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC28.08■■■□□ 2.09
PER1O15534 MIR2861-201ENST00000636310 90 ntBASIC28.08■■■□□ 2.09
PER1O15534 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PER1O15534 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PER1O15534 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
PER1O15534 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PER1O15534 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
PER1O15534 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
PER1O15534 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.08
PER1O15534 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC28.07■■■□□ 2.08
PER1O15534 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC28.07■■■□□ 2.08
PER1O15534 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
PER1O15534 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC28.07■■■□□ 2.08
PER1O15534 AC142086.2-201ENST00000569753 217 ntBASIC28.07■■■□□ 2.08
PER1O15534 CYP2T3P-201ENST00000601990 817 ntBASIC28.07■■■□□ 2.08
PER1O15534 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC28.07■■■□□ 2.08
PER1O15534 AC008694.1-202ENST00000636953 945 ntBASIC28.07■■■□□ 2.08
PER1O15534 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC28.07■■■□□ 2.08
PER1O15534 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC28.07■■■□□ 2.08
PER1O15534 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PER1O15534 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PER1O15534 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
PER1O15534 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC28.07■■■□□ 2.08
PER1O15534 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
PER1O15534 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC28.06■■■□□ 2.08
PER1O15534 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
PER1O15534 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PER1O15534 MCRIP2P1-201ENST00000394346 511 ntBASIC28.06■■■□□ 2.08
PER1O15534 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PER1O15534 MIPEPP3-201ENST00000412105 444 ntBASIC28.06■■■□□ 2.08
PER1O15534 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC28.06■■■□□ 2.08
PER1O15534 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
PER1O15534 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC28.06■■■□□ 2.08
PER1O15534 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC28.06■■■□□ 2.08
PER1O15534 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC28.06■■■□□ 2.08
PER1O15534 AL109923.1-201ENST00000618799 583 ntBASIC28.06■■■□□ 2.08
PER1O15534 GCK-205ENST00000437084 1385 ntTSL 5 BASIC28.06■■■□□ 2.08
PER1O15534 USP48-205ENST00000421625 2818 ntTSL 2 BASIC28.06■■■□□ 2.08
PER1O15534 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
PER1O15534 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC28.06■■■□□ 2.08
PER1O15534 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PER1O15534 KRT17P1-201ENST00000399211 1546 ntBASIC28.06■■■□□ 2.08
PER1O15534 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
PER1O15534 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PER1O15534 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC28.06■■■□□ 2.08
PER1O15534 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PER1O15534 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
PER1O15534 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
PER1O15534 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
PER1O15534 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PER1O15534 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC28.05■■■□□ 2.08
PER1O15534 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC28.05■■■□□ 2.08
PER1O15534 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
PER1O15534 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC28.05■■■□□ 2.08
PER1O15534 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC28.05■■■□□ 2.08
PER1O15534 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC28.05■■■□□ 2.08
PER1O15534 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC28.05■■■□□ 2.08
PER1O15534 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC28.05■■■□□ 2.08
PER1O15534 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC28.05■■■□□ 2.08
PER1O15534 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PER1O15534 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
PER1O15534 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC28.04■■■□□ 2.08
PER1O15534 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PER1O15534 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PER1O15534 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC28.04■■■□□ 2.08
PER1O15534 MKRN4P-201ENST00000444706 1521 ntBASIC28.04■■■□□ 2.08
PER1O15534 AC087633.2-202ENST00000565166 1439 ntBASIC28.04■■■□□ 2.08
PER1O15534 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PER1O15534 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PER1O15534 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
PER1O15534 AL138781.1-201ENST00000566567 1274 ntBASIC28.04■■■□□ 2.08
PER1O15534 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC28.04■■■□□ 2.08
PER1O15534 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
PER1O15534 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC28.04■■■□□ 2.08
PER1O15534 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PER1O15534 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC28.04■■■□□ 2.08
PER1O15534 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PER1O15534 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PER1O15534 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PER1O15534 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PER1O15534 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PER1O15534 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC28.03■■■□□ 2.08
PER1O15534 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
PER1O15534 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC28.03■■■□□ 2.08
PER1O15534 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PER1O15534 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PER1O15534 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC28.03■■■□□ 2.08
PER1O15534 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PER1O15534 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC28.02■■■□□ 2.08
PER1O15534 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PER1O15534 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms