Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.52■□□□□ 0.71
UPK1AO00322 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
UPK1AO00322 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
UPK1AO00322 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
UPK1AO00322 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPK1AO00322 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPK1AO00322 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPK1AO00322 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.51■□□□□ 0.71
UPK1AO00322 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPK1AO00322 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.51■□□□□ 0.71
UPK1AO00322 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.51■□□□□ 0.71
UPK1AO00322 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.51■□□□□ 0.71
UPK1AO00322 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPK1AO00322 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.51■□□□□ 0.71
UPK1AO00322 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.51■□□□□ 0.71
UPK1AO00322 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.51■□□□□ 0.71
UPK1AO00322 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPK1AO00322 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.51■□□□□ 0.71
UPK1AO00322 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPK1AO00322 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPK1AO00322 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPK1AO00322 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPK1AO00322 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPK1AO00322 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.5■□□□□ 0.71
UPK1AO00322 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPK1AO00322 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPK1AO00322 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPK1AO00322 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.5■□□□□ 0.71
UPK1AO00322 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.5■□□□□ 0.71
UPK1AO00322 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.5■□□□□ 0.71
UPK1AO00322 MIR6821-201ENST00000617625 74 ntBASIC19.5■□□□□ 0.71
UPK1AO00322 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.5■□□□□ 0.71
UPK1AO00322 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.5■□□□□ 0.71
UPK1AO00322 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPK1AO00322 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1AO00322 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1AO00322 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.49■□□□□ 0.71
UPK1AO00322 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1AO00322 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
UPK1AO00322 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1AO00322 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.49■□□□□ 0.71
UPK1AO00322 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1AO00322 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1AO00322 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.49■□□□□ 0.71
UPK1AO00322 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.49■□□□□ 0.71
UPK1AO00322 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
UPK1AO00322 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1AO00322 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.49■□□□□ 0.71
UPK1AO00322 KRT18P61-201ENST00000585825 1298 ntBASIC19.49■□□□□ 0.71
UPK1AO00322 AP001160.3-201ENST00000601484 763 ntBASIC19.49■□□□□ 0.71
UPK1AO00322 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
UPK1AO00322 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1AO00322 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
UPK1AO00322 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
UPK1AO00322 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1AO00322 AC019069.1-201ENST00000610008 1333 ntBASIC19.49■□□□□ 0.71
UPK1AO00322 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1AO00322 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK1AO00322 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.48■□□□□ 0.71
UPK1AO00322 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1AO00322 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1AO00322 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1AO00322 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
UPK1AO00322 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
UPK1AO00322 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.48■□□□□ 0.71
UPK1AO00322 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
UPK1AO00322 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1AO00322 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.48■□□□□ 0.71
UPK1AO00322 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1AO00322 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1AO00322 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1AO00322 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.48■□□□□ 0.71
UPK1AO00322 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.48■□□□□ 0.71
UPK1AO00322 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1AO00322 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1AO00322 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1AO00322 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1AO00322 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1AO00322 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK1AO00322 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.47■□□□□ 0.71
UPK1AO00322 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.47■□□□□ 0.71
UPK1AO00322 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.47■□□□□ 0.71
UPK1AO00322 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
UPK1AO00322 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPK1AO00322 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPK1AO00322 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPK1AO00322 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
UPK1AO00322 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.47■□□□□ 0.71
UPK1AO00322 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UPK1AO00322 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
UPK1AO00322 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
UPK1AO00322 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.47■□□□□ 0.71
UPK1AO00322 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UPK1AO00322 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.47■□□□□ 0.71
UPK1AO00322 AC087623.3-201ENST00000607047 1098 ntBASIC19.47■□□□□ 0.71
UPK1AO00322 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
UPK1AO00322 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UPK1AO00322 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.47■□□□□ 0.71
UPK1AO00322 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPK1AO00322 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms