Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CGB1A6NKQ9 AIRN-201ENST00000601203 4374 ntBASIC16.42■□□□□ 0.22
CGB1A6NKQ9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 ZNRF2P3-201ENST00000424200 374 ntBASIC16.42■□□□□ 0.22
CGB1A6NKQ9 YBX1P1-201ENST00000445822 960 ntBASIC16.42■□□□□ 0.22
CGB1A6NKQ9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.42■□□□□ 0.22
CGB1A6NKQ9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 SLC7A5P2-201ENST00000553010 536 ntBASIC16.41■□□□□ 0.22
CGB1A6NKQ9 CCDC92B-201ENST00000575506 885 ntBASIC16.41■□□□□ 0.22
CGB1A6NKQ9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 KRT16P2-201ENST00000414673 1423 ntBASIC16.41■□□□□ 0.22
CGB1A6NKQ9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 FP700111.2-201ENST00000619190 1892 ntBASIC16.41■□□□□ 0.22
CGB1A6NKQ9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
CGB1A6NKQ9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CGB1A6NKQ9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CGB1A6NKQ9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CGB1A6NKQ9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms