Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.44■■□□□ 1.82
LOC102724428A0A0B4J2F2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
LOC102724428A0A0B4J2F2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
LOC102724428A0A0B4J2F2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC26.44■■□□□ 1.82
LOC102724428A0A0B4J2F2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
LOC102724428A0A0B4J2F2 C1orf229-201ENST00000623686 2258 ntBASIC26.44■■□□□ 1.82
LOC102724428A0A0B4J2F2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.43■■□□□ 1.82
LOC102724428A0A0B4J2F2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
LOC102724428A0A0B4J2F2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
LOC102724428A0A0B4J2F2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC26.43■■□□□ 1.82
LOC102724428A0A0B4J2F2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
LOC102724428A0A0B4J2F2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC26.43■■□□□ 1.82
LOC102724428A0A0B4J2F2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
LOC102724428A0A0B4J2F2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
LOC102724428A0A0B4J2F2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
LOC102724428A0A0B4J2F2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC26.43■■□□□ 1.82
LOC102724428A0A0B4J2F2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC26.43■■□□□ 1.82
LOC102724428A0A0B4J2F2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
LOC102724428A0A0B4J2F2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC26.43■■□□□ 1.82
LOC102724428A0A0B4J2F2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC26.43■■□□□ 1.82
LOC102724428A0A0B4J2F2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LOC102724428A0A0B4J2F2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
LOC102724428A0A0B4J2F2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LOC102724428A0A0B4J2F2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LOC102724428A0A0B4J2F2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LOC102724428A0A0B4J2F2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LOC102724428A0A0B4J2F2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LOC102724428A0A0B4J2F2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC26.42■■□□□ 1.82
LOC102724428A0A0B4J2F2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LOC102724428A0A0B4J2F2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LOC102724428A0A0B4J2F2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LOC102724428A0A0B4J2F2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
LOC102724428A0A0B4J2F2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
LOC102724428A0A0B4J2F2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.42■■□□□ 1.82
LOC102724428A0A0B4J2F2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
LOC102724428A0A0B4J2F2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
LOC102724428A0A0B4J2F2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
LOC102724428A0A0B4J2F2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.41■■□□□ 1.82
LOC102724428A0A0B4J2F2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LOC102724428A0A0B4J2F2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
LOC102724428A0A0B4J2F2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC26.41■■□□□ 1.82
LOC102724428A0A0B4J2F2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC26.41■■□□□ 1.82
LOC102724428A0A0B4J2F2 AC012306.2-201ENST00000609350 630 ntBASIC26.41■■□□□ 1.82
LOC102724428A0A0B4J2F2 AC097493.4-201ENST00000641197 219 ntBASIC26.41■■□□□ 1.82
LOC102724428A0A0B4J2F2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LOC102724428A0A0B4J2F2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
LOC102724428A0A0B4J2F2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC26.41■■□□□ 1.82
LOC102724428A0A0B4J2F2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
LOC102724428A0A0B4J2F2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LOC102724428A0A0B4J2F2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
LOC102724428A0A0B4J2F2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC26.4■■□□□ 1.82
LOC102724428A0A0B4J2F2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
LOC102724428A0A0B4J2F2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC26.4■■□□□ 1.82
LOC102724428A0A0B4J2F2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
LOC102724428A0A0B4J2F2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
LOC102724428A0A0B4J2F2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
LOC102724428A0A0B4J2F2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
LOC102724428A0A0B4J2F2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC26.4■■□□□ 1.82
LOC102724428A0A0B4J2F2 RARRES2P10-201ENST00000564312 460 ntBASIC26.4■■□□□ 1.82
LOC102724428A0A0B4J2F2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC26.4■■□□□ 1.82
LOC102724428A0A0B4J2F2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
LOC102724428A0A0B4J2F2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC26.4■■□□□ 1.82
LOC102724428A0A0B4J2F2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
LOC102724428A0A0B4J2F2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
LOC102724428A0A0B4J2F2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
LOC102724428A0A0B4J2F2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC26.39■■□□□ 1.82
LOC102724428A0A0B4J2F2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
LOC102724428A0A0B4J2F2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
LOC102724428A0A0B4J2F2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC26.39■■□□□ 1.82
LOC102724428A0A0B4J2F2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC26.39■■□□□ 1.82
LOC102724428A0A0B4J2F2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC26.39■■□□□ 1.82
LOC102724428A0A0B4J2F2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
LOC102724428A0A0B4J2F2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
LOC102724428A0A0B4J2F2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
LOC102724428A0A0B4J2F2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC26.39■■□□□ 1.82
LOC102724428A0A0B4J2F2 PRKY-204ENST00000533551 1019 ntBASIC26.39■■□□□ 1.82
LOC102724428A0A0B4J2F2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
LOC102724428A0A0B4J2F2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
LOC102724428A0A0B4J2F2 AL355075.4-201ENST00000554988 638 ntBASIC26.39■■□□□ 1.82
LOC102724428A0A0B4J2F2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
LOC102724428A0A0B4J2F2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
LOC102724428A0A0B4J2F2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
LOC102724428A0A0B4J2F2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms