Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV27A0A087WT01 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 RARRES2P11-201ENST00000635158 484 ntBASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV27A0A087WT01 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 AC010141.2-201ENST00000452426 721 ntBASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV27A0A087WT01 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 KRT16P2-201ENST00000414673 1423 ntBASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 AC245052.3-201ENST00000450182 901 ntBASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 AC104187.1-201ENST00000607510 612 ntBASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 AC120498.10-201ENST00000621827 505 ntBASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 AL512408.1-201ENST00000569378 2000 ntBASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV27A0A087WT01 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 AL121603.2-201ENST00000557373 2117 ntBASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV27A0A087WT01 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.58■□□□□ 0.57
TRAV27A0A087WT01 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV27A0A087WT01 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TRAV27A0A087WT01 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
TRAV27A0A087WT01 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV27A0A087WT01 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
TRAV27A0A087WT01 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms