Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC119868.1-201ENST00000579307 336 ntBASIC8.56□□□□□ -1.04
SNX18Q96RF0 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 AC005392.2-201ENST00000595748 301 ntTSL 3 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 AC007228.1-201ENST00000600036 142 ntBASIC8.56□□□□□ -1.04
SNX18Q96RF0 RPS16-207ENST00000601655 492 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SNX18Q96RF0 VDAC3P1-201ENST00000604654 850 ntBASIC8.56□□□□□ -1.04
SNX18Q96RF0 AL117339.1-203ENST00000638066 888 ntBASIC8.56□□□□□ -1.04
SNX18Q96RF0 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 SHQ1-203ENST00000463369 2065 ntTSL 2 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 PPP2R5C-201ENST00000328724 4045 ntTSL 2 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 SLC3A1-210ENST00000611973 1737 ntTSL 5 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 EIF4G3-202ENST00000356916 2179 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SNX18Q96RF0 ZBTB10-201ENST00000379091 2181 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 RPS6KB1-201ENST00000225577 5375 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SNX18Q96RF0 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 SEC61A2-204ENST00000379020 2252 ntTSL 5 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 GJA5-202ENST00000579774 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SNX18Q96RF0 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
SNX18Q96RF0 AC024610.2-205ENST00000584758 1567 ntTSL 5 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
SNX18Q96RF0 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
SNX18Q96RF0 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC8.56□□□□□ -1.04
SNX18Q96RF0 ZNF322-208ENST00000622479 4882 ntAPPRIS P1 TSL 4 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC209007.1-201ENST00000401075 1342 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 NPIPA7-202ENST00000530217 1331 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 HVCN1-207ENST00000548312 1301 ntTSL 2 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 CD160-202ENST00000369288 1424 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 FHAD1-206ENST00000375998 4355 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 MCC-209ENST00000515367 3844 ntTSL 5 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 NFATC2IP-203ENST00000564978 2350 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 CD40LG-202ENST00000370629 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 SNHG16-207ENST00000590435 1947 ntTSL 5 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 CCDC13-AS1-201ENST00000418161 2049 ntTSL 2 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 IPO5P1-201ENST00000593576 2887 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 TEX35-201ENST00000319416 1023 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC132008.1-201ENST00000394682 286 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 RPL36A-203ENST00000427805 910 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 AL365273.1-201ENST00000433113 587 ntTSL 2 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 SEZ6-204ENST00000442608 3805 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 AL357079.1-202ENST00000445226 294 ntTSL 3 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC023141.2-201ENST00000449138 550 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 AL157392.2-201ENST00000449462 474 ntTSL 3 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 LINC01627-201ENST00000452923 243 ntTSL 3 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 HSFX4-201ENST00000457775 1184 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 RN7SL108P-201ENST00000481903 297 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 RN7SL344P-201ENST00000485522 296 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 MARK2P6-201ENST00000494974 897 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC022784.6-205ENST00000518619 807 ntTSL 3 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC044839.2-201ENST00000531982 534 ntTSL 3 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 IMMP1L-209ENST00000532287 685 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 BDNF-AS-209ENST00000532965 572 ntTSL 4 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC024901.1-201ENST00000535764 718 ntTSL 3 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC002070.1-201ENST00000537366 693 ntTSL 3 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC025030.1-201ENST00000548007 573 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC141586.2-201ENST00000565111 572 ntTSL 3 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC093525.5-201ENST00000569220 572 ntTSL 3 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC009060.2-201ENST00000569264 106 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 HLF-208ENST00000573945 2977 ntTSL 5 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 RN7SL45P-201ENST00000578050 298 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 RN7SL531P-201ENST00000578464 282 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 PROX1-AS1-205ENST00000598091 720 ntTSL 5 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC008555.5-201ENST00000603718 515 ntTSL 2 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC007216.5-201ENST00000612457 109 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC019322.3-201ENST00000616104 478 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 Metazoa_SRP.58-201ENST00000618720 282 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC138932.4-201ENST00000619102 109 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC138969.4-201ENST00000620593 109 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 SNORA17B-202ENST00000626886 136 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 ENPP6-201ENST00000296741 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 EPB41L5-204ENST00000443902 3167 ntTSL 2 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC009403.1-202ENST00000460022 1356 ntTSL 2 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 TOB1-201ENST00000268957 1467 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 CBR3-AS1-204ENST00000453159 1499 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 SERPINB3-201ENST00000283752 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 TEX11-203ENST00000374333 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 TMEM87A-203ENST00000448392 3049 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC016526.3-201ENST00000624275 3931 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 AC120036.5-201ENST00000528139 2491 ntBASIC8.55□□□□□ -1.04
SNX18Q96RF0 CD46-209ENST00000367047 3089 ntTSL 5 BASIC8.55□□□□□ -1.04
SNX18Q96RF0 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 MAN1A2P1-201ENST00000590286 1400 ntBASIC8.54□□□□□ -1.04
SNX18Q96RF0 PNPLA1-201ENST00000312917 1518 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SNX18Q96RF0 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 CDRT1-203ENST00000395667 3016 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 MAPK10-240ENST00000639175 2596 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
SNX18Q96RF0 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms