Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HYDIN-203ENST00000321489 3685 ntAPPRIS P3 TSL 2 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 C4orf46-201ENST00000379205 3521 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 ETV1-206ENST00000405218 3391 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 AC060780.1-203ENST00000634503 2406 ntTSL 3 BASIC8.58□□□□□ -1.04
NPIPA3F8WFD2 SEC61A2-204ENST00000379020 2252 ntTSL 5 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 CEP57-201ENST00000325486 3098 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 STX12-201ENST00000373943 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 NR4A2-201ENST00000339562 3472 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 SEPT2-206ENST00000402092 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 DDX24-210ENST00000622786 1730 ntTSL 5 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 DCTN2-202ENST00000543672 1321 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 GRIA1-208ENST00000518142 2761 ntTSL 2 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 AL133355.1-201ENST00000568017 2388 ntBASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 LINC01998-201ENST00000464673 1967 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 C11orf57-202ENST00000393047 3669 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 PIK3CD-AS1-201ENST00000377320 1823 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 TRPM3-211ENST00000396280 4671 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 IFT122-206ENST00000440957 4007 ntTSL 2 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 TBC1D13-201ENST00000223865 3378 ntTSL 2 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 OR2B11-203ENST00000641527 4545 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 AC003958.2-202ENST00000432258 3890 ntTSL 2 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 MCFD2-207ENST00000409913 3975 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 MAJIN-201ENST00000301896 843 ntAPPRIS P3 TSL 5 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 S100A7A-201ENST00000329256 491 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 KIR2DL4-202ENST00000346587 1026 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 RN7SKP45-201ENST00000363509 304 ntBASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 RNA5SP349-201ENST00000363743 109 ntBASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 RN7SKP217-201ENST00000364640 340 ntBASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 ST3GAL3-214ENST00000372366 670 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 GHRH-203ENST00000373614 570 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 RNU4-86P-201ENST00000410135 219 ntBASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 HNRNPA1P64-201ENST00000411674 922 ntBASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 RPS5P2-201ENST00000415238 640 ntBASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 ACTG1P24-201ENST00000423783 877 ntBASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 AL355310.1-201ENST00000436416 596 ntTSL 3 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 RPL17P1-201ENST00000445304 536 ntBASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 AC010907.2-201ENST00000456450 693 ntTSL 3 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 AC139451.1-201ENST00000463176 330 ntBASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 ADAM9-209ENST00000487273 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 NDUFB4-205ENST00000492739 309 ntTSL 2 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 AC131025.1-201ENST00000521756 588 ntTSL 3 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 AC117372.1-201ENST00000548633 620 ntBASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 FRG2DP-201ENST00000564452 852 ntTSL 2 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 RN7SL783P-201ENST00000577950 301 ntBASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 AC008753.2-201ENST00000597420 387 ntBASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 ZNF675-207ENST00000600313 543 ntTSL 4 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 MZT1P1-201ENST00000603781 246 ntBASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 RN7SL726P-201ENST00000605957 299 ntBASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 TRIM16-201ENST00000336708 2900 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 SLC17A6-201ENST00000263160 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 TDRD3-202ENST00000377881 2532 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 LINC00994-201ENST00000485805 2129 ntTSL 2 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 AC026746.1-201ENST00000505623 2105 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 ALG13-225ENST00000621367 3893 ntTSL 2 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 SCML2-201ENST00000251900 4200 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 MROH5-201ENST00000430863 4164 ntAPPRIS P5 TSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 KLHL7-AS1-201ENST00000419813 2564 ntTSL 2 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 ANK3-205ENST00000373827 7202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 APOL2-201ENST00000249066 2685 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 ZNF138-202ENST00000359735 2679 ntTSL 4 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 VWA5A-202ENST00000392744 2691 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
NPIPA3F8WFD2 RBM23-204ENST00000399922 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 DTL-206ENST00000542077 4471 ntTSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AC027369.1-202ENST00000534734 1330 ntBASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AC097534.2-203ENST00000609900 1921 ntBASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AP000552.1-202ENST00000436681 3714 ntTSL 5 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 NUDT13-207ENST00000544879 2258 ntTSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 C7orf55-LUC7L2-201ENST00000541515 1661 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 DNM1P46-201ENST00000341853 3831 ntTSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 ZNF644-202ENST00000347275 2036 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 SPDYE9P-202ENST00000571071 2024 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 SPDYE11-203ENST00000573748 2024 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 SPDYE10P-201ENST00000576332 2021 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 UPRT-202ENST00000373379 2234 ntTSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 CPT1B-201ENST00000312108 2592 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 POLR3G-204ENST00000504930 3251 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 H3F3AP6-201ENST00000230495 411 ntBASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 WISP3-201ENST00000230529 1235 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 SCGB2A1-201ENST00000244930 521 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 MT1B-201ENST00000334346 380 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 WNT16-202ENST00000361301 1230 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 H3F3AP4-201ENST00000369387 411 ntBASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AL355297.1-201ENST00000402808 388 ntBASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AL365214.1-201ENST00000404237 997 ntBASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AC007362.1-208ENST00000423425 553 ntTSL 4 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AL139327.3-201ENST00000433721 379 ntBASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AC012363.2-201ENST00000437837 555 ntTSL 4 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AL389889.1-201ENST00000443747 566 ntTSL 4 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 OR11Q1P-201ENST00000451582 877 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms