Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC007952.3-202ENST00000435028 428 ntTSL 5 BASIC9.91□□□□□ -0.82
MTHFRP42898 AL159166.1-201ENST00000437430 329 ntTSL 3 BASIC9.91□□□□□ -0.82
MTHFRP42898 WBP1LP6-201ENST00000438434 424 ntBASIC9.91□□□□□ -0.82
MTHFRP42898 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC9.91□□□□□ -0.82
MTHFRP42898 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC9.91□□□□□ -0.82
MTHFRP42898 AC063980.1-201ENST00000514282 414 ntTSL 3 BASIC9.91□□□□□ -0.82
MTHFRP42898 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC9.91□□□□□ -0.82
MTHFRP42898 TEX26-AS1-210ENST00000588726 841 ntTSL 5 BASIC9.91□□□□□ -0.82
MTHFRP42898 AF038458.3-201ENST00000592518 500 ntTSL 3 BASIC9.91□□□□□ -0.82
MTHFRP42898 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC9.91□□□□□ -0.82
MTHFRP42898 uc_338.3-201ENST00000613268 181 ntBASIC9.91□□□□□ -0.82
MTHFRP42898 AC005691.1-201ENST00000624723 401 ntBASIC9.91□□□□□ -0.82
MTHFRP42898 CYFIP1-203ENST00000610365 4515 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
MTHFRP42898 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
MTHFRP42898 RSL1D1-204ENST00000571133 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
MTHFRP42898 HYDIN-203ENST00000321489 3685 ntAPPRIS P3 TSL 2 BASIC9.91□□□□□ -0.82
MTHFRP42898 IQSEC2-201ENST00000375365 4004 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
MTHFRP42898 RNF40-202ENST00000357890 3917 ntTSL 2 BASIC9.91□□□□□ -0.82
MTHFRP42898 SCRN1-201ENST00000242059 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
MTHFRP42898 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
MTHFRP42898 LINC01734-201ENST00000412672 1518 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
MTHFRP42898 CYP2G1P-201ENST00000252909 2511 ntTSL 2 BASIC9.91□□□□□ -0.82
MTHFRP42898 MYF6-201ENST00000228641 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
MTHFRP42898 C11orf57-209ENST00000532163 3739 ntTSL 2 BASIC9.91□□□□□ -0.82
MTHFRP42898 LIG3-201ENST00000262327 3055 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
MTHFRP42898 LPXN-202ENST00000528489 1751 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
MTHFRP42898 RFFL-212ENST00000584655 4039 ntTSL 2 BASIC9.91□□□□□ -0.82
MTHFRP42898 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 AL356235.1-201ENST00000602791 2363 ntTSL 2 BASIC9.9□□□□□ -0.82
MTHFRP42898 PLEKHB2-201ENST00000234115 4208 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 ABI1-201ENST00000346832 3289 ntTSL 2 BASIC9.9□□□□□ -0.82
MTHFRP42898 ERN1-201ENST00000433197 7876 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 SOX5-203ENST00000396007 1379 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 AC079316.2-201ENST00000623545 1375 ntBASIC9.9□□□□□ -0.82
MTHFRP42898 DEPDC5-205ENST00000400248 5307 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 DLD-205ENST00000440410 1993 ntTSL 2 BASIC9.9□□□□□ -0.82
MTHFRP42898 TUFT1-203ENST00000368849 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 CYP2C19-201ENST00000371321 1901 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 FMN1-207ENST00000559047 4260 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
MTHFRP42898 CEACAM21-201ENST00000187608 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 KIF9-202ENST00000335044 3357 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 DEPDC5-202ENST00000382112 5363 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 DPP9-203ENST00000594671 3851 ntTSL 5 BASIC9.9□□□□□ -0.82
MTHFRP42898 AC093904.4-201ENST00000565044 3273 ntBASIC9.9□□□□□ -0.82
MTHFRP42898 TGIF1-203ENST00000345133 1088 ntTSL 3 BASIC9.9□□□□□ -0.82
MTHFRP42898 GLYATL3-201ENST00000371197 1113 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
MTHFRP42898 B4GALT6-203ENST00000383131 1239 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 POLR2CP1-201ENST00000453699 765 ntBASIC9.9□□□□□ -0.82
MTHFRP42898 AL357874.2-201ENST00000457044 679 ntTSL 3 BASIC9.9□□□□□ -0.82
MTHFRP42898 AC093627.5-201ENST00000462565 662 ntTSL 3 BASIC9.9□□□□□ -0.82
MTHFRP42898 AC092807.3-202ENST00000498304 508 ntTSL 3 BASIC9.9□□□□□ -0.82
MTHFRP42898 AC084251.1-201ENST00000521867 382 ntBASIC9.9□□□□□ -0.82
MTHFRP42898 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 AP000916.2-201ENST00000528904 286 ntBASIC9.9□□□□□ -0.82
MTHFRP42898 OR7E8P-201ENST00000532847 1000 ntBASIC9.9□□□□□ -0.82
MTHFRP42898 WDR61-202ENST00000558311 1266 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
MTHFRP42898 AC079789.1-201ENST00000561655 885 ntBASIC9.9□□□□□ -0.82
MTHFRP42898 RPL23AP86-201ENST00000573796 541 ntBASIC9.9□□□□□ -0.82
MTHFRP42898 E2F3P1-201ENST00000589887 1230 ntBASIC9.9□□□□□ -0.82
MTHFRP42898 AL022324.3-201ENST00000609330 747 ntBASIC9.9□□□□□ -0.82
MTHFRP42898 Metazoa_SRP.175-201ENST00000619837 250 ntBASIC9.9□□□□□ -0.82
MTHFRP42898 NDUFA6-AS1-216ENST00000621190 766 ntTSL 5 BASIC9.9□□□□□ -0.82
MTHFRP42898 AC005086.2-201ENST00000624939 228 ntBASIC9.9□□□□□ -0.82
MTHFRP42898 ITFG2-AS1-202ENST00000636122 962 ntTSL 5 BASIC9.9□□□□□ -0.82
MTHFRP42898 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC9.9□□□□□ -0.82
MTHFRP42898 KCNMA1-228ENST00000638223 4340 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
MTHFRP42898 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 SEC24D-201ENST00000280551 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 LINC00930-202ENST00000557075 1541 ntTSL 2 BASIC9.9□□□□□ -0.82
MTHFRP42898 ECE2-204ENST00000402825 3445 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 STRIP1-202ENST00000369796 3125 ntTSL 2 BASIC9.9□□□□□ -0.82
MTHFRP42898 LINC01104-202ENST00000452354 3115 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC9.9□□□□□ -0.82
MTHFRP42898 SPDYE9P-202ENST00000571071 2024 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 SPDYE11-203ENST00000573748 2024 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 SPDYE10P-201ENST00000576332 2021 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
MTHFRP42898 RBM26-201ENST00000267229 3624 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
MTHFRP42898 TPD52L3-201ENST00000314556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
MTHFRP42898 C1orf74-201ENST00000294811 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
MTHFRP42898 SP2-AS1-201ENST00000411573 1738 ntTSL 2 BASIC9.9□□□□□ -0.83
MTHFRP42898 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC9.9□□□□□ -0.83
MTHFRP42898 TACC2-203ENST00000358010 3815 ntTSL 5 BASIC9.9□□□□□ -0.83
MTHFRP42898 B3GALNT1-201ENST00000320474 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
MTHFRP42898 SLC7A3-201ENST00000298085 2235 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
MTHFRP42898 ZNF568-202ENST00000415168 3774 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
MTHFRP42898 HTR3B-202ENST00000537778 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
MTHFRP42898 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 RASSF4-201ENST00000340258 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 PTPN20-202ENST00000374339 1388 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 BZW2-207ENST00000433922 1862 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
MTHFRP42898 AC113554.2-201ENST00000577647 4862 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
MTHFRP42898 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 PRR11-201ENST00000262293 2332 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 AC074194.2-201ENST00000636429 2348 ntBASIC9.89□□□□□ -0.83
MTHFRP42898 CARD8-213ENST00000519940 2056 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
MTHFRP42898 NOP2-218ENST00000545200 2751 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 ASPA-201ENST00000263080 5431 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 FAAP24-202ENST00000588258 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MTHFRP42898 AC104825.2-201ENST00000505448 3249 ntBASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms