Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TACC1-204ENST00000518415 3011 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 MYO7B-201ENST00000409090 3567 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 CLEC4M-205ENST00000394122 1898 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 ADH6-201ENST00000237653 1691 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 BTN2A1-204ENST00000469185 1687 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 TPD52L3-201ENST00000314556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 PSMF1-202ENST00000333082 3686 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 WRAP53-201ENST00000316024 4011 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 INTS4-206ENST00000529807 1845 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 LECT2-201ENST00000274507 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 BPIFA1-201ENST00000354297 1079 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 CLDN20-201ENST00000367165 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 UBE2C-205ENST00000372568 914 ntTSL 2 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 TRAV8-6-201ENST00000390443 561 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 BZW2-203ENST00000407633 898 ntTSL 3 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 RNA5SP304-201ENST00000411199 104 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AL136366.1-201ENST00000416996 964 ntTSL 2 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 ZNF70P1-201ENST00000417480 624 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC004920.1-201ENST00000422831 482 ntTSL 3 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 Z93930.2-205ENST00000422972 409 ntTSL 2 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC073188.2-201ENST00000424036 701 ntTSL 5 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 TYROBP-202ENST00000424586 541 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 RPL10P5-201ENST00000427719 639 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 OR13C6P-201ENST00000433495 950 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 RPE-210ENST00000438204 796 ntTSL 2 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 CD46P1-201ENST00000441364 763 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AL445493.2-201ENST00000442684 945 ntTSL 3 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 RPE-213ENST00000445268 668 ntTSL 5 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC078845.1-201ENST00000445293 889 ntTSL 5 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC073626.2-201ENST00000449443 316 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 RBBP4P2-201ENST00000478252 1264 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC105265.1-201ENST00000479379 179 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 RN7SL291P-201ENST00000487916 289 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 LINC02142-201ENST00000500616 577 ntTSL 3 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 FAM197Y9-203ENST00000505707 345 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC022140.1-202ENST00000507887 638 ntTSL 3 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC084357.2-201ENST00000509615 275 ntTSL 5 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC063980.1-201ENST00000514282 414 ntTSL 3 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 TMEM185AP1-201ENST00000524311 546 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 NDUFC2-202ENST00000525085 495 ntTSL 3 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AP003064.2-201ENST00000528983 510 ntTSL 3 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 KCTD21-AS1-205ENST00000530261 910 ntTSL 4 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 NDUFC2-205ENST00000534029 422 ntTSL 2 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 ARHGDIB-207ENST00000541644 911 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC003002.1-201ENST00000543226 732 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 IZUMO3-202ENST00000543880 1229 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 RAD52-218ENST00000545564 681 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC008770.2-201ENST00000547473 542 ntAPPRIS P1 TSL 4 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC004801.5-201ENST00000552958 550 ntTSL 4 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AL049833.2-201ENST00000557211 750 ntTSL 3 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 MOK-239ENST00000561150 568 ntTSL 4 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC015688.1-201ENST00000584894 199 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC006504.5-211ENST00000588636 576 ntTSL 4 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC020907.4-201ENST00000605640 526 ntTSL 3 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC007663.4-201ENST00000608275 631 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 U62317.5-201ENST00000609268 362 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 Metazoa_SRP.159-201ENST00000612585 265 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC004678.1-201ENST00000615016 929 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 FAM197Y4-201ENST00000616275 467 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 Metazoa_SRP.155-201ENST00000616367 282 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 KRTAP10-12-202ENST00000618832 282 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 FAM197Y5-203ENST00000619815 467 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 LINC01206-231ENST00000629026 858 ntTSL 5 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 TMEM52B-201ENST00000298530 2731 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 AC116913.1-201ENST00000565387 2168 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 MFSD8-259ENST00000642042 2303 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 PRAMEF30P-201ENST00000438176 1417 ntBASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 ADAM32-201ENST00000379907 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 LINC00402-201ENST00000419499 3340 ntTSL 2 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 SOX5-215ENST00000545921 2589 ntAPPRIS ALT1 TSL 2 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 DLGAP1-AS5-202ENST00000565811 2594 ntTSL 2 BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 TARID-209ENST00000630119 4294 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
NPIPA3F8WFD2 SLAMF7-202ENST00000368042 2365 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 AL035696.1-201ENST00000381078 2007 ntTSL 2 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 EPB41L5-204ENST00000443902 3167 ntTSL 2 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 CDH23-203ENST00000398788 4329 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 PARD6G-AS1-202ENST00000586421 3333 ntTSL 2 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 EBNA1BP2-201ENST00000236051 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 TNMD-201ENST00000373031 1339 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 PBLD-207ENST00000495025 1349 ntTSL 5 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 ATP8A2-201ENST00000255283 3287 ntTSL 5 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 FAM13A-213ENST00000509094 2762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 ZNF226-215ENST00000590089 2788 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 ITM2A-201ENST00000373298 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 CHRNA6-201ENST00000276410 2400 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 AP000265.1-201ENST00000565959 1782 ntBASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 GNGT1-205ENST00000455502 1943 ntTSL 2 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 CRIP3-201ENST00000274990 800 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 OR4B1-201ENST00000309562 930 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 HIST1H2BC-201ENST00000314332 659 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 SPRR3-202ENST00000331860 985 ntAPPRIS P2 TSL 3 BASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 RN7SKP7-201ENST00000410540 285 ntBASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 RN7SKP252-201ENST00000411210 327 ntBASIC8.59□□□□□ -1.03
NPIPA3F8WFD2 AL590133.1-201ENST00000412838 368 ntTSL 3 BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms