Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PARP11-204ENST00000447133 4377 ntTSL 2 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
SNX18Q96RF0 ZIK1P1-201ENST00000456074 1459 ntBASIC8.63□□□□□ -1.03
SNX18Q96RF0 AC096642.1-201ENST00000612055 2614 ntBASIC8.63□□□□□ -1.03
SNX18Q96RF0 RBFOX2-202ENST00000359369 1409 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SNX18Q96RF0 AC026358.1-201ENST00000539391 2256 ntTSL 3 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
SNX18Q96RF0 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SNX18Q96RF0 TRIM6-208ENST00000506134 1398 ntTSL 2 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 MLLT3-209ENST00000629733 3264 ntTSL 5 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 LINC02363-201ENST00000317596 2153 ntTSL 2 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 MAK-201ENST00000313243 3984 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 TSSK4-202ENST00000339917 1321 ntAPPRIS ALT1 TSL 2 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 SEMA6A-212ENST00000513137 3640 ntTSL 2 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SNX18Q96RF0 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 MYO6-203ENST00000369981 8692 ntTSL 5 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SNX18Q96RF0 GHRH-201ENST00000237527 461 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
SNX18Q96RF0 SYN3-201ENST00000332840 972 ntTSL 5 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 COLEC10-201ENST00000332843 1266 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SNX18Q96RF0 FGGY-202ENST00000371210 1041 ntTSL 2 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 GAPDHP63-201ENST00000405405 1007 ntBASIC8.62□□□□□ -1.03
SNX18Q96RF0 ATP5G3-203ENST00000409194 795 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 AC079602.1-201ENST00000412750 271 ntBASIC8.62□□□□□ -1.03
SNX18Q96RF0 SRP68P3-201ENST00000416871 344 ntBASIC8.62□□□□□ -1.03
SNX18Q96RF0 AC007362.1-208ENST00000423425 553 ntTSL 4 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 RPP21-223ENST00000436442 522 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SNX18Q96RF0 AL772155.3-201ENST00000444097 578 ntBASIC8.62□□□□□ -1.03
SNX18Q96RF0 ATP6AP2-204ENST00000447485 1254 ntTSL 5 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 AL683807.2-201ENST00000453953 548 ntTSL 2 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 RN7SL211P-201ENST00000485246 276 ntBASIC8.62□□□□□ -1.03
SNX18Q96RF0 AC233724.4-201ENST00000511894 267 ntBASIC8.62□□□□□ -1.03
SNX18Q96RF0 AC134698.2-201ENST00000519172 311 ntBASIC8.62□□□□□ -1.03
SNX18Q96RF0 RN7SL411P-201ENST00000585204 300 ntBASIC8.62□□□□□ -1.03
SNX18Q96RF0 AL121590.1-201ENST00000621402 458 ntBASIC8.62□□□□□ -1.03
SNX18Q96RF0 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 AC073869.5-201ENST00000635979 465 ntTSL 5 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 PARL-212ENST00000639100 1513 ntTSL 5 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SNX18Q96RF0 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 RCAN1-208ENST00000482533 2686 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SNX18Q96RF0 ARNT-208ENST00000505755 2427 ntTSL 2 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 HPS5-206ENST00000531848 2160 ntTSL 5 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 FMN1-203ENST00000558197 4060 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SNX18Q96RF0 SLAMF7-211ENST00000621377 2608 ntTSL 2 BASIC8.62□□□□□ -1.03
SNX18Q96RF0 ITGB1BP2-205ENST00000538820 1439 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SNX18Q96RF0 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SNX18Q96RF0 MAPK10-232ENST00000515400 2076 ntTSL 5 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 NDE1-201ENST00000396354 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SNX18Q96RF0 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 PGCP1-202ENST00000436252 1358 ntBASIC8.61□□□□□ -1.03
SNX18Q96RF0 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SNX18Q96RF0 AC005307.1-201ENST00000567877 1570 ntTSL 3 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 SLC25A13-201ENST00000265631 3136 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
SNX18Q96RF0 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 AC008870.1-201ENST00000566996 3009 ntTSL 2 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SNX18Q96RF0 ICA1-205ENST00000401396 1742 ntTSL 5 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 AMPD3-208ENST00000528723 2753 ntTSL 2 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 LINC01702-201ENST00000230113 487 ntTSL 5 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 MMP26-201ENST00000300762 989 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SNX18Q96RF0 APOL4-201ENST00000328429 844 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SNX18Q96RF0 KRTAP8-1-201ENST00000329621 556 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 NME9-202ENST00000333911 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SNX18Q96RF0 PRRG3-202ENST00000370354 650 ntTSL 3 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 IL31-201ENST00000377035 904 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SNX18Q96RF0 C9orf135-201ENST00000377197 873 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SNX18Q96RF0 TRAV2-201ENST00000390424 348 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 UQCR10-202ENST00000401406 584 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SNX18Q96RF0 AL022329.1-201ENST00000412773 488 ntTSL 2 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 OR8B1P-201ENST00000419328 918 ntBASIC8.61□□□□□ -1.03
SNX18Q96RF0 AC114402.1-201ENST00000427282 328 ntBASIC8.61□□□□□ -1.03
SNX18Q96RF0 AC005013.1-201ENST00000436594 588 ntTSL 4 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 LINC01304-203ENST00000453880 812 ntTSL 2 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 RPL3P6-201ENST00000474162 1204 ntBASIC8.61□□□□□ -1.03
SNX18Q96RF0 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 CCDC169-210ENST00000491049 753 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SNX18Q96RF0 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 PRPS1L1-201ENST00000506618 1090 ntAPPRIS ALT2 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 AC063980.1-201ENST00000514282 414 ntTSL 3 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 AP001330.1-201ENST00000524287 731 ntTSL 3 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 AP004607.8-201ENST00000526848 323 ntBASIC8.61□□□□□ -1.03
SNX18Q96RF0 AC027369.4-201ENST00000534243 816 ntBASIC8.61□□□□□ -1.03
SNX18Q96RF0 AC012150.1-201ENST00000553075 593 ntTSL 4 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 ZMYND19P1-201ENST00000554267 787 ntBASIC8.61□□□□□ -1.03
SNX18Q96RF0 AC005225.3-201ENST00000555972 519 ntTSL 2 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 DIO2-211ENST00000557125 517 ntTSL 3 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 DNM1P49-201ENST00000564895 474 ntBASIC8.61□□□□□ -1.03
SNX18Q96RF0 AC005323.1-201ENST00000579914 569 ntTSL 4 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 AC068473.2-201ENST00000587315 474 ntTSL 3 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 AP002439.1-201ENST00000588204 480 ntTSL 4 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 AC121493.1-201ENST00000602316 450 ntBASIC8.61□□□□□ -1.03
SNX18Q96RF0 TRAC-201ENST00000611116 976 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
SNX18Q96RF0 JPX_1.1-201ENST00000614715 135 ntBASIC8.61□□□□□ -1.03
SNX18Q96RF0 ST7-AS1_2.1-201ENST00000615247 111 ntBASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms