Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CCDC174-202ENST00000383794 2942 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SNX18Q96RF0 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SNX18Q96RF0 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SNX18Q96RF0 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 LINC01266-201ENST00000420823 3948 ntTSL 2 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 L3MBTL3-202ENST00000368136 4235 ntAPPRIS P4 TSL 5 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 ADH1A-201ENST00000209668 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SNX18Q96RF0 SAT2-201ENST00000269298 946 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SNX18Q96RF0 SNX12-201ENST00000276105 720 ntAPPRIS ALT1 TSL 3 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 CPT1B-201ENST00000312108 2592 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SNX18Q96RF0 APOL1-201ENST00000319136 3000 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
SNX18Q96RF0 CLVS2-202ENST00000368438 1359 ntTSL 5 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 OPTN-205ENST00000378757 3321 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SNX18Q96RF0 IGKV1D-42-201ENST00000390278 373 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 STK32A-203ENST00000398523 1637 ntTSL 2 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 AL021937.1-201ENST00000420171 1558 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SNX18Q96RF0 Z93930.2-205ENST00000422972 409 ntTSL 2 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 AL109613.1-201ENST00000431770 722 ntTSL 2 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 NINJ2-203ENST00000433832 945 ntTSL 2 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 RPL5P26-201ENST00000438138 877 ntBASIC8.67□□□□□ -1.02
SNX18Q96RF0 ULBP3-202ENST00000438272 735 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SNX18Q96RF0 AC245060.1-201ENST00000440829 358 ntBASIC8.67□□□□□ -1.02
SNX18Q96RF0 AL135924.1-201ENST00000446146 423 ntBASIC8.67□□□□□ -1.02
SNX18Q96RF0 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 BX842568.2-201ENST00000453595 1230 ntBASIC8.67□□□□□ -1.02
SNX18Q96RF0 AC096536.1-203ENST00000455380 515 ntTSL 5 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 IL5RA-210ENST00000456302 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SNX18Q96RF0 IGKV1-37-201ENST00000465170 398 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 IGKV1D-8-201ENST00000471857 534 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 TYW3-205ENST00000479111 1130 ntTSL 3 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 TCEAL4-212ENST00000494801 1008 ntAPPRIS P3 TSL 2 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 AC098799.1-201ENST00000504752 800 ntBASIC8.67□□□□□ -1.02
SNX18Q96RF0 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 IGKV1D-37-201ENST00000509129 353 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 OR5AC4P-201ENST00000509306 919 ntBASIC8.67□□□□□ -1.02
SNX18Q96RF0 AC096759.2-202ENST00000515230 777 ntTSL 3 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 ZNF506-203ENST00000540806 1424 ntAPPRIS P3 TSL 2 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 AC025423.1-201ENST00000544710 374 ntTSL 5 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 SRSF5-204ENST00000553548 526 ntTSL 4 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 ISCA2-202ENST00000554924 489 ntTSL 2 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 RASGRP1-206ENST00000558164 1757 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SNX18Q96RF0 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SNX18Q96RF0 AC019294.2-201ENST00000565686 553 ntTSL 4 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 AL356961.1-201ENST00000567967 1923 ntBASIC8.67□□□□□ -1.02
SNX18Q96RF0 AC009075.2-201ENST00000568483 301 ntBASIC8.67□□□□□ -1.02
SNX18Q96RF0 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 RN7SL819P-201ENST00000581896 270 ntBASIC8.67□□□□□ -1.02
SNX18Q96RF0 ORMDL3-208ENST00000584220 414 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
SNX18Q96RF0 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
SNX18Q96RF0 ZNF283-208ENST00000593268 552 ntTSL 5 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 UNGP3-201ENST00000603734 675 ntBASIC8.67□□□□□ -1.02
SNX18Q96RF0 AL008726.1-201ENST00000607703 569 ntTSL 4 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 AC020558.3-201ENST00000623335 1703 ntBASIC8.67□□□□□ -1.02
SNX18Q96RF0 AL138828.1-206ENST00000625353 811 ntTSL 5 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 STRADA-226ENST00000638276 1865 ntTSL 5 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC8.67□□□□□ -1.02
SNX18Q96RF0 AC048380.2-201ENST00000624725 3548 ntBASIC8.67□□□□□ -1.02
SNX18Q96RF0 SEZ6L-204ENST00000402979 3306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SNX18Q96RF0 GPNMB-202ENST00000381990 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
SNX18Q96RF0 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 AC120114.1-201ENST00000450909 1762 ntTSL 3 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 DNAH10-209ENST00000614082 3484 ntTSL 5 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 FHL2-207ENST00000409177 4881 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SNX18Q96RF0 ANKRD6-218ENST00000522441 3157 ntAPPRIS ALT1 TSL 2 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNX18Q96RF0 AL591848.3-201ENST00000570141 2968 ntBASIC8.66□□□□□ -1.02
SNX18Q96RF0 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SNX18Q96RF0 CRISP2-202ENST00000616725 1376 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 KCNH5-204ENST00000420622 2711 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SNX18Q96RF0 PSMB7-201ENST00000259457 980 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNX18Q96RF0 HBG2-201ENST00000336906 602 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNX18Q96RF0 ALKAL2-203ENST00000401503 748 ntTSL 2 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 PPIAP29-201ENST00000414949 499 ntBASIC8.66□□□□□ -1.02
SNX18Q96RF0 HCG23-205ENST00000426643 610 ntTSL 3 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 IGLVIVOR22-2-201ENST00000430579 330 ntBASIC8.66□□□□□ -1.02
SNX18Q96RF0 SNRPG-204ENST00000438261 515 ntTSL 2 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 AL358790.1-203ENST00000440461 579 ntTSL 5 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 RPSAP26-201ENST00000442699 741 ntBASIC8.66□□□□□ -1.02
SNX18Q96RF0 OR2S1P-201ENST00000447226 950 ntBASIC8.66□□□□□ -1.02
SNX18Q96RF0 AC245884.4-201ENST00000450173 472 ntBASIC8.66□□□□□ -1.02
SNX18Q96RF0 AC107613.1-201ENST00000450488 1018 ntBASIC8.66□□□□□ -1.02
SNX18Q96RF0 AL133353.1-201ENST00000452391 303 ntTSL 5 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 RN7SL361P-201ENST00000470785 298 ntBASIC8.66□□□□□ -1.02
SNX18Q96RF0 LGI1-204ENST00000478763 600 ntTSL 2 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 LYRM4-207ENST00000480566 941 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SNX18Q96RF0 AL627309.2-201ENST00000493797 323 ntTSL 2 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 SLC25A14P1-201ENST00000502867 901 ntBASIC8.66□□□□□ -1.02
SNX18Q96RF0 GCNT1P2-201ENST00000504682 595 ntBASIC8.66□□□□□ -1.02
SNX18Q96RF0 IGLVI-56-201ENST00000521342 342 ntBASIC8.66□□□□□ -1.02
SNX18Q96RF0 MT1JP-202ENST00000563395 408 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SNX18Q96RF0 LINC00555-201ENST00000569288 442 ntBASIC8.66□□□□□ -1.02
SNX18Q96RF0 AC026461.3-201ENST00000569778 444 ntTSL 2 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 AC135048.2-201ENST00000572471 561 ntTSL 4 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 AC008567.2-201ENST00000589751 656 ntTSL 3 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 ZIM2-202ENST00000593931 483 ntTSL 3 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 AC008555.4-201ENST00000605481 568 ntBASIC8.66□□□□□ -1.02
SNX18Q96RF0 AC083798.2-203ENST00000608346 564 ntTSL 2 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 LINC00623-202ENST00000614062 830 ntTSL 5 BASIC8.66□□□□□ -1.02
SNX18Q96RF0 AL049794.1-201ENST00000616572 774 ntTSL 2 BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms