Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SYNJ2-201ENST00000355585 7378 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 APOBEC2-201ENST00000244669 1151 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 AC022400.5-201ENST00000415917 1031 ntTSL 3 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 AC016738.2-203ENST00000433012 489 ntTSL 3 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 AL592114.3-201ENST00000437919 446 ntTSL 3 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 AC007163.2-201ENST00000479041 750 ntTSL 4 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 RN7SL397P-201ENST00000487309 298 ntBASIC9.97□□□□□ -0.81
LMO3Q8TAP4 LINC00491-201ENST00000505527 722 ntTSL 3 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 GABRP-207ENST00000519598 1284 ntTSL 5 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 LINC02454-202ENST00000541391 612 ntTSL 3 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 PRR13-210ENST00000551003 1009 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 AC010542.2-201ENST00000568560 511 ntTSL 5 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 AC007608.3-202ENST00000570241 1109 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 AF001548.2-201ENST00000574212 836 ntTSL 2 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 SHBG-218ENST00000576728 776 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 PPP3CB-AS1-211ENST00000600887 489 ntTSL 5 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 AC004466.3-201ENST00000615576 546 ntBASIC9.97□□□□□ -0.81
LMO3Q8TAP4 SMIM11B-204ENST00000623661 1021 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 Metazoa_SRP.208-201ENST00000629083 297 ntBASIC9.97□□□□□ -0.81
LMO3Q8TAP4 AC025268.1-201ENST00000632192 1199 ntBASIC9.97□□□□□ -0.81
LMO3Q8TAP4 AL358790.1-202ENST00000632794 583 ntTSL 5 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 TCF4-226ENST00000565018 2357 ntTSL 5 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 ACTR3BP2-201ENST00000413404 1373 ntBASIC9.97□□□□□ -0.81
LMO3Q8TAP4 AC013652.1-201ENST00000560197 1378 ntTSL 5 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 ZNF160-214ENST00000601421 4688 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 LARS2-203ENST00000415258 4744 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 IKZF3-209ENST00000377952 1435 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 STAG3-218ENST00000615138 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 PMS2CL-204ENST00000486256 3327 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 AGPAT4-203ENST00000366911 7705 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 ABCG1-204ENST00000398437 3475 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LMO3Q8TAP4 SLC39A9-202ENST00000336643 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LMO3Q8TAP4 SLC11A2-212ENST00000547688 2401 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
LMO3Q8TAP4 CD3EAP-201ENST00000309424 3286 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
LMO3Q8TAP4 CDC27-204ENST00000527547 2579 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LMO3Q8TAP4 KCND1-202ENST00000376477 3306 ntTSL 2 BASIC9.96□□□□□ -0.81
LMO3Q8TAP4 MOV10-202ENST00000369644 4100 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LMO3Q8TAP4 PCDH15-223ENST00000495484 1896 ntTSL 5 BASIC9.96□□□□□ -0.81
LMO3Q8TAP4 MKL2-207ENST00000573051 1938 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LMO3Q8TAP4 GCM1-201ENST00000259803 2765 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LMO3Q8TAP4 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.81
LMO3Q8TAP4 SPACA9-201ENST00000350499 894 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 RN7SKP294-201ENST00000362770 338 ntBASIC9.96□□□□□ -0.82
LMO3Q8TAP4 SMIM9-201ENST00000369529 904 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 TNNT3-208ENST00000397301 818 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 HBA1-202ENST00000397797 504 ntTSL 2 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 AURKC-202ENST00000415300 978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 PRDX3P1-201ENST00000418695 763 ntBASIC9.96□□□□□ -0.82
LMO3Q8TAP4 OR14L1P-201ENST00000419087 918 ntBASIC9.96□□□□□ -0.82
LMO3Q8TAP4 CFL1P1-203ENST00000438248 2120 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 TRAF3IP2-AS1-206ENST00000449449 784 ntTSL 3 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 AC093152.1-201ENST00000495684 564 ntTSL 5 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 AC099509.2-201ENST00000513926 406 ntTSL 3 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 TBCA-208ENST00000520361 446 ntTSL 2 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 OR10Y1P-201ENST00000528485 974 ntBASIC9.96□□□□□ -0.82
LMO3Q8TAP4 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 AC068733.1-201ENST00000532430 1288 ntTSL 2 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 AP003396.2-201ENST00000533726 1297 ntBASIC9.96□□□□□ -0.82
LMO3Q8TAP4 GMDS-AS1-213ENST00000534441 738 ntTSL 3 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 AL110292.1-201ENST00000550024 477 ntTSL 3 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 AC008569.2-201ENST00000589702 889 ntTSL 5 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 AC136469.1-201ENST00000595706 511 ntTSL 5 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 AURKC-207ENST00000599062 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 LAMTOR5-AS1-236ENST00000626261 464 ntTSL 5 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 LINC00506-204ENST00000630120 587 ntTSL 4 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 C2-AS1-201ENST00000630806 762 ntTSL 2 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 LAMA3-201ENST00000269217 5671 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 PSMC1P10-201ENST00000434820 1327 ntBASIC9.96□□□□□ -0.82
LMO3Q8TAP4 ADGRE2-212ENST00000601345 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 AL008729.1-203ENST00000606150 2305 ntTSL 2 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 AL023280.1-201ENST00000414840 1423 ntBASIC9.96□□□□□ -0.82
LMO3Q8TAP4 NAA16-201ENST00000379406 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 FCRL4-201ENST00000271532 3459 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 NECAP1-201ENST00000339754 2593 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 SORL1-211ENST00000532694 3692 ntTSL 2 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 P2RY10-204ENST00000544091 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 AP000997.2-201ENST00000564619 8400 ntBASIC9.96□□□□□ -0.82
LMO3Q8TAP4 EFCAB5-208ENST00000536908 2826 ntTSL 2 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 AP003469.4-201ENST00000565617 2825 ntBASIC9.96□□□□□ -0.82
LMO3Q8TAP4 ZNF765-206ENST00000594030 7588 ntTSL 4 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 ATP6V0A1-201ENST00000264649 4110 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 RBM26-AS1-201ENST00000456602 1756 ntTSL 2 BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 ELP3-210ENST00000521015 3158 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LMO3Q8TAP4 EXOC6-204ENST00000443748 3310 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 ASCC1-202ENST00000317168 2002 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 AC009060.1-202ENST00000502126 2242 ntTSL 2 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 TPM1-233ENST00000610733 3957 ntTSL 2 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 ABCB1-201ENST00000265724 4645 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 DLGAP5-201ENST00000247191 2973 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 ST3GAL1-207ENST00000521180 6951 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 CEACAM22P-201ENST00000446628 3016 ntTSL 2 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 GJA5-202ENST00000579774 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 ZNF345-206ENST00000529555 3527 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 CSTL1-201ENST00000246020 510 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 FCHO2-201ENST00000287761 1287 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 CSTL1-202ENST00000347397 736 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LMO3Q8TAP4 RHBDD1-203ENST00000409053 538 ntTSL 4 BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms