Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 HSPA8P6-201ENST00000451965 1552 ntBASIC8.67□□□□□ -1.02
P04436 NBR2-203ENST00000467245 1158 ntTSL 2 BASIC8.67□□□□□ -1.02
P04436 AC133435.1-201ENST00000498753 576 ntBASIC8.67□□□□□ -1.02
P04436 CEP57L1-205ENST00000517392 2771 ntAPPRIS P3 TSL 2 BASIC8.67□□□□□ -1.02
P04436 EVX1-AS-201ENST00000517726 480 ntTSL 3 BASIC8.67□□□□□ -1.02
P04436 LINC01606-206ENST00000520929 411 ntTSL 3 BASIC8.67□□□□□ -1.02
P04436 SDC2-207ENST00000522911 677 ntTSL 3 BASIC8.67□□□□□ -1.02
P04436 ARHGDIB-207ENST00000541644 911 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
P04436 AC008770.2-201ENST00000547473 542 ntAPPRIS P1 TSL 4 BASIC8.67□□□□□ -1.02
P04436 ACAD10-220ENST00000549590 2888 ntTSL 5 BASIC8.67□□□□□ -1.02
P04436 AC012085.2-201ENST00000550287 1587 ntTSL 2 BASIC8.67□□□□□ -1.02
P04436 AC012150.1-201ENST00000553075 593 ntTSL 4 BASIC8.67□□□□□ -1.02
P04436 PTGR2-203ENST00000553813 1351 ntTSL 5 BASIC8.67□□□□□ -1.02
P04436 ALDH1A2-217ENST00000559517 1468 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
P04436 AC005154.1-230ENST00000578994 644 ntTSL 4 BASIC8.67□□□□□ -1.02
P04436 LINC01892-202ENST00000583985 540 ntTSL 4 BASIC8.67□□□□□ -1.02
P04436 AC005580.1-202ENST00000587140 562 ntTSL 5 BASIC8.67□□□□□ -1.02
P04436 TREM1-204ENST00000589614 772 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
P04436 AC092634.5-207ENST00000596569 805 ntTSL 5 BASIC8.67□□□□□ -1.02
P04436 SCGB2B3P-201ENST00000599388 409 ntBASIC8.67□□□□□ -1.02
P04436 HINT1P2-201ENST00000604731 235 ntBASIC8.67□□□□□ -1.02
P04436 RN7SKP4-201ENST00000606815 322 ntBASIC8.67□□□□□ -1.02
P04436 STRADA-224ENST00000617949 705 ntTSL 2 BASIC8.67□□□□□ -1.02
P04436 NF1P9-202ENST00000629550 966 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
P04436 AC007529.2-201ENST00000637435 1094 ntTSL 5 BASIC8.67□□□□□ -1.02
P04436 SPIN3-205ENST00000638289 4614 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
P04436 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
P04436 PC-202ENST00000393958 4005 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
P04436 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
P04436 AC005077.4-201ENST00000421546 3495 ntBASIC8.67□□□□□ -1.02
P04436 FOXN1-201ENST00000226247 3436 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
P04436 ST3GAL6-201ENST00000265261 3362 ntTSL 2 BASIC8.67□□□□□ -1.02
P04436 DHX35-203ENST00000373325 3287 ntTSL 5 BASIC8.67□□□□□ -1.02
P04436 PPM1L-202ENST00000464260 2735 ntTSL 2 BASIC8.67□□□□□ -1.02
P04436 PDIA6-202ENST00000381611 2534 ntTSL 2 BASIC8.66□□□□□ -1.02
P04436 AC138907.1-201ENST00000570183 2405 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 CTAGE12P-201ENST00000400348 2364 ntBASIC8.66□□□□□ -1.02
P04436 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 MAT2B-202ENST00000321757 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 CARD8-213ENST00000519940 2056 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
P04436 TMEM196-202ENST00000405844 4054 ntTSL 5 BASIC8.66□□□□□ -1.02
P04436 PFKFB1-202ENST00000375006 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 TXLNGY-203ENST00000445715 1915 ntBASIC8.66□□□□□ -1.02
P04436 SLC9B2-203ENST00000503103 1911 ntTSL 2 BASIC8.66□□□□□ -1.02
P04436 NUP85-203ENST00000540768 1926 ntTSL 2 BASIC8.66□□□□□ -1.02
P04436 ECE2-204ENST00000402825 3445 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 ZSCAN30-211ENST00000610712 3439 ntTSL 4 BASIC8.66□□□□□ -1.02
P04436 WDR36-204ENST00000513710 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 BRD7P4-201ENST00000406170 1522 ntBASIC8.66□□□□□ -1.02
P04436 ATP6V1C1-203ENST00000518857 1501 ntTSL 2 BASIC8.66□□□□□ -1.02
P04436 TYW1B-202ENST00000612372 1543 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 FMN1-203ENST00000558197 4060 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 SVILP1-201ENST00000422642 2676 ntBASIC8.66□□□□□ -1.02
P04436 AL096869.3-201ENST00000567837 2626 ntBASIC8.66□□□□□ -1.02
P04436 OSCP1-202ENST00000354267 767 ntTSL 5 BASIC8.66□□□□□ -1.02
P04436 CNST-201ENST00000366511 645 ntTSL 3 BASIC8.66□□□□□ -1.02
P04436 TMEM59-203ENST00000371341 1116 ntTSL 2 BASIC8.66□□□□□ -1.02
P04436 REG3A-203ENST00000409839 788 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
P04436 MAGEA13P-201ENST00000418272 951 ntBASIC8.66□□□□□ -1.02
P04436 AL023773.1-201ENST00000423985 1124 ntBASIC8.66□□□□□ -1.02
P04436 LINC00869-202ENST00000430442 1065 ntTSL 5 BASIC8.66□□□□□ -1.02
P04436 LINC01105-202ENST00000431182 708 ntTSL 4 BASIC8.66□□□□□ -1.02
P04436 AL445493.2-201ENST00000442684 945 ntTSL 3 BASIC8.66□□□□□ -1.02
P04436 AL360181.1-201ENST00000452591 184 ntTSL 5 BASIC8.66□□□□□ -1.02
P04436 RN7SL359P-201ENST00000473502 288 ntBASIC8.66□□□□□ -1.02
P04436 ENPP7P4-201ENST00000487446 1086 ntBASIC8.66□□□□□ -1.02
P04436 AC114744.1-201ENST00000498116 666 ntBASIC8.66□□□□□ -1.02
P04436 RPS20-207ENST00000520627 423 ntTSL 5 BASIC8.66□□□□□ -1.02
P04436 AL355916.3-201ENST00000556347 779 ntAPPRIS P1 TSL 4 BASIC8.66□□□□□ -1.02
P04436 PABPN1-208ENST00000557702 778 ntTSL 2 BASIC8.66□□□□□ -1.02
P04436 AC087481.1-201ENST00000561684 965 ntBASIC8.66□□□□□ -1.02
P04436 AC009414.2-201ENST00000565283 366 ntBASIC8.66□□□□□ -1.02
P04436 RN7SL783P-201ENST00000577950 301 ntBASIC8.66□□□□□ -1.02
P04436 ZRANB2-AS2-206ENST00000583678 551 ntTSL 4 BASIC8.66□□□□□ -1.02
P04436 AC107990.1-201ENST00000590415 489 ntBASIC8.66□□□□□ -1.02
P04436 MIR6124-201ENST00000617177 85 ntBASIC8.66□□□□□ -1.02
P04436 AC008870.5-201ENST00000624143 650 ntBASIC8.66□□□□□ -1.02
P04436 C11orf54-201ENST00000331239 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 LEP-201ENST00000308868 3420 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 ZMYND8-220ENST00000617418 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 JPX-201ENST00000414209 2194 ntTSL 2 BASIC8.66□□□□□ -1.02
P04436 AJ003147.3-201ENST00000622989 2199 ntBASIC8.66□□□□□ -1.02
P04436 AL162274.3-201ENST00000623138 3109 ntBASIC8.66□□□□□ -1.02
P04436 AL590999.1-202ENST00000607215 3053 ntBASIC8.66□□□□□ -1.02
P04436 ZNF644-202ENST00000347275 2036 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 CHODL-205ENST00000400131 2036 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC8.66□□□□□ -1.02
P04436 SET-204ENST00000372692 2850 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 RBM17-205ENST00000446108 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 DHFR2-206ENST00000619045 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 SERPINB3-201ENST00000283752 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 AC139099.4-201ENST00000625083 3504 ntBASIC8.66□□□□□ -1.02
P04436 CDC42SE1-202ENST00000439374 3498 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
P04436 PITRM1-203ENST00000380994 2579 ntTSL 5 BASIC8.66□□□□□ -1.02
P04436 CACNB2-202ENST00000324631 3446 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
P04436 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 DDX19B-201ENST00000288071 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 MAGEB16-201ENST00000399985 1667 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
P04436 FCRLA-205ENST00000350710 1639 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms