Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.31■□□□□ 0.68
COMMD3-BMI1R4GMX3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD3-BMI1R4GMX3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD3-BMI1R4GMX3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COMMD3-BMI1R4GMX3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COMMD3-BMI1R4GMX3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD3-BMI1R4GMX3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.3■□□□□ 0.68
COMMD3-BMI1R4GMX3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 GUSBP5-201ENST00000418136 578 ntBASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 AC006455.2-201ENST00000429931 906 ntBASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 AC020916.1-201ENST00000587762 1774 ntBASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD3-BMI1R4GMX3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD3-BMI1R4GMX3 AC112907.3-201ENST00000577781 2400 ntBASIC19.27■□□□□ 0.68
COMMD3-BMI1R4GMX3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD3-BMI1R4GMX3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.27■□□□□ 0.68
COMMD3-BMI1R4GMX3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD3-BMI1R4GMX3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD3-BMI1R4GMX3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD3-BMI1R4GMX3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.27■□□□□ 0.68
COMMD3-BMI1R4GMX3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
COMMD3-BMI1R4GMX3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
COMMD3-BMI1R4GMX3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
COMMD3-BMI1R4GMX3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.27■□□□□ 0.68
COMMD3-BMI1R4GMX3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
COMMD3-BMI1R4GMX3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD3-BMI1R4GMX3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.27■□□□□ 0.68
COMMD3-BMI1R4GMX3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
COMMD3-BMI1R4GMX3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COMMD3-BMI1R4GMX3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COMMD3-BMI1R4GMX3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COMMD3-BMI1R4GMX3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COMMD3-BMI1R4GMX3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.27■□□□□ 0.67
COMMD3-BMI1R4GMX3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
COMMD3-BMI1R4GMX3 AL158211.5-201ENST00000623583 2518 ntBASIC19.26■□□□□ 0.67
COMMD3-BMI1R4GMX3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
COMMD3-BMI1R4GMX3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
COMMD3-BMI1R4GMX3 AC133637.1-201ENST00000624115 1537 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms