Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HRH3Q9Y5N1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HRH3Q9Y5N1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
HRH3Q9Y5N1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HRH3Q9Y5N1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 TSPY20P-201ENST00000450910 630 ntBASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 AF201337.1-201ENST00000520239 748 ntBASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 AC105036.2-201ENST00000569468 176 ntBASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HRH3Q9Y5N1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19■□□□□ 0.63
HRH3Q9Y5N1 AC068338.2-201ENST00000563278 1430 ntBASIC19■□□□□ 0.63
HRH3Q9Y5N1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19■□□□□ 0.63
HRH3Q9Y5N1 KRT18P6-201ENST00000555540 1265 ntBASIC19■□□□□ 0.63
HRH3Q9Y5N1 AC098934.4-201ENST00000564127 592 ntBASIC19■□□□□ 0.63
HRH3Q9Y5N1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19■□□□□ 0.63
HRH3Q9Y5N1 TMEM191A-211ENST00000637163 1067 ntBASIC19■□□□□ 0.63
HRH3Q9Y5N1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
HRH3Q9Y5N1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19■□□□□ 0.63
HRH3Q9Y5N1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HRH3Q9Y5N1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HRH3Q9Y5N1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19■□□□□ 0.63
HRH3Q9Y5N1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HRH3Q9Y5N1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HRH3Q9Y5N1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19■□□□□ 0.63
HRH3Q9Y5N1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HRH3Q9Y5N1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HRH3Q9Y5N1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19■□□□□ 0.63
HRH3Q9Y5N1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HRH3Q9Y5N1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HRH3Q9Y5N1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HRH3Q9Y5N1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HRH3Q9Y5N1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HRH3Q9Y5N1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HRH3Q9Y5N1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.99■□□□□ 0.63
HRH3Q9Y5N1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HRH3Q9Y5N1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HRH3Q9Y5N1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HRH3Q9Y5N1 AC069152.1-201ENST00000438030 544 ntBASIC18.99■□□□□ 0.63
HRH3Q9Y5N1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HRH3Q9Y5N1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HRH3Q9Y5N1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HRH3Q9Y5N1 AC120498.10-201ENST00000621827 505 ntBASIC18.99■□□□□ 0.63
HRH3Q9Y5N1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HRH3Q9Y5N1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HRH3Q9Y5N1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HRH3Q9Y5N1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HRH3Q9Y5N1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
HRH3Q9Y5N1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HRH3Q9Y5N1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
HRH3Q9Y5N1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HRH3Q9Y5N1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.98■□□□□ 0.63
HRH3Q9Y5N1 SLC29A4P1-201ENST00000398760 971 ntBASIC18.98■□□□□ 0.63
HRH3Q9Y5N1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.98■□□□□ 0.63
HRH3Q9Y5N1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.98■□□□□ 0.63
HRH3Q9Y5N1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.98■□□□□ 0.63
HRH3Q9Y5N1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.98■□□□□ 0.63
HRH3Q9Y5N1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.98■□□□□ 0.63
HRH3Q9Y5N1 FEM1AP4-201ENST00000443167 1987 ntBASIC18.98■□□□□ 0.63
HRH3Q9Y5N1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HRH3Q9Y5N1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HRH3Q9Y5N1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HRH3Q9Y5N1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HRH3Q9Y5N1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.97■□□□□ 0.63
HRH3Q9Y5N1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HRH3Q9Y5N1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HRH3Q9Y5N1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
HRH3Q9Y5N1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HRH3Q9Y5N1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HRH3Q9Y5N1 AC091799.1-201ENST00000422823 811 ntBASIC18.97■□□□□ 0.63
HRH3Q9Y5N1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.97■□□□□ 0.63
HRH3Q9Y5N1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.97■□□□□ 0.63
HRH3Q9Y5N1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.97■□□□□ 0.63
HRH3Q9Y5N1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HRH3Q9Y5N1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.97■□□□□ 0.63
HRH3Q9Y5N1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HRH3Q9Y5N1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HRH3Q9Y5N1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HRH3Q9Y5N1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
HRH3Q9Y5N1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
HRH3Q9Y5N1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HRH3Q9Y5N1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms