Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGC4Q9Y5F7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGC4Q9Y5F7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGC4Q9Y5F7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PCDHGC4Q9Y5F7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHGC4Q9Y5F7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGC4Q9Y5F7 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.83■□□□□ 0.93
PCDHGC4Q9Y5F7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHGC4Q9Y5F7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PCDHGC4Q9Y5F7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PCDHGC4Q9Y5F7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PCDHGC4Q9Y5F7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGC4Q9Y5F7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGC4Q9Y5F7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.83■□□□□ 0.92
PCDHGC4Q9Y5F7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
PCDHGC4Q9Y5F7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PCDHGC4Q9Y5F7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCDHGC4Q9Y5F7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PCDHGC4Q9Y5F7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHGC4Q9Y5F7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGC4Q9Y5F7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.82■□□□□ 0.92
PCDHGC4Q9Y5F7 RARRES2P4-201ENST00000514074 484 ntBASIC20.82■□□□□ 0.92
PCDHGC4Q9Y5F7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHGC4Q9Y5F7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHGC4Q9Y5F7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.82■□□□□ 0.92
PCDHGC4Q9Y5F7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHGC4Q9Y5F7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
PCDHGC4Q9Y5F7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGC4Q9Y5F7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGC4Q9Y5F7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGC4Q9Y5F7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PCDHGC4Q9Y5F7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGC4Q9Y5F7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGC4Q9Y5F7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGC4Q9Y5F7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGC4Q9Y5F7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGC4Q9Y5F7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGC4Q9Y5F7 AC069236.1-201ENST00000604339 616 ntBASIC20.81■□□□□ 0.92
PCDHGC4Q9Y5F7 FAM21FP-204ENST00000608637 956 ntBASIC20.81■□□□□ 0.92
PCDHGC4Q9Y5F7 AC008694.1-202ENST00000636953 945 ntBASIC20.81■□□□□ 0.92
PCDHGC4Q9Y5F7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGC4Q9Y5F7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGC4Q9Y5F7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHGC4Q9Y5F7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
PCDHGC4Q9Y5F7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGC4Q9Y5F7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGC4Q9Y5F7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGC4Q9Y5F7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGC4Q9Y5F7 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.8■□□□□ 0.92
PCDHGC4Q9Y5F7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGC4Q9Y5F7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHGC4Q9Y5F7 NCF1B-203ENST00000435988 1254 ntBASIC20.8■□□□□ 0.92
PCDHGC4Q9Y5F7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGC4Q9Y5F7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGC4Q9Y5F7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHGC4Q9Y5F7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGC4Q9Y5F7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGC4Q9Y5F7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
PCDHGC4Q9Y5F7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 AC093787.1-201ENST00000450396 207 ntBASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 AC083906.2-201ENST00000511578 360 ntBASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 AC105036.2-201ENST00000569468 176 ntBASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 AC133552.2-202ENST00000575694 574 ntBASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 OR10C1-204ENST00000622521 1039 ntBASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGC4Q9Y5F7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 AF201337.1-201ENST00000520239 748 ntBASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 AL121832.2-201ENST00000610979 668 ntBASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHGC4Q9Y5F7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms