Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
VAPAQ9P0L0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VAPAQ9P0L0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VAPAQ9P0L0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
VAPAQ9P0L0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.5■□□□□ 0.71
VAPAQ9P0L0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VAPAQ9P0L0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 AC106739.1-201ENST00000617035 715 ntBASIC19.49■□□□□ 0.71
VAPAQ9P0L0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VAPAQ9P0L0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 AC131212.1-201ENST00000613771 668 ntBASIC19.48■□□□□ 0.71
VAPAQ9P0L0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.48■□□□□ 0.71
VAPAQ9P0L0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
VAPAQ9P0L0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
VAPAQ9P0L0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.47■□□□□ 0.71
VAPAQ9P0L0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VAPAQ9P0L0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VAPAQ9P0L0 EDA-201ENST00000338901 1233 ntBASIC19.47■□□□□ 0.71
VAPAQ9P0L0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.47■□□□□ 0.71
VAPAQ9P0L0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VAPAQ9P0L0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.47■□□□□ 0.71
VAPAQ9P0L0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VAPAQ9P0L0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VAPAQ9P0L0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VAPAQ9P0L0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.47■□□□□ 0.71
VAPAQ9P0L0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
VAPAQ9P0L0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VAPAQ9P0L0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.47■□□□□ 0.71
VAPAQ9P0L0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VAPAQ9P0L0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 RASA4CP-201ENST00000424092 1398 ntBASIC19.46■□□□□ 0.71
VAPAQ9P0L0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 AC012414.1-201ENST00000556676 535 ntBASIC19.46■□□□□ 0.71
VAPAQ9P0L0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
VAPAQ9P0L0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.45■□□□□ 0.7
VAPAQ9P0L0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VAPAQ9P0L0 MIR939-201ENST00000401314 82 ntBASIC19.45■□□□□ 0.7
VAPAQ9P0L0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.45■□□□□ 0.7
VAPAQ9P0L0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAPAQ9P0L0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.45■□□□□ 0.7
VAPAQ9P0L0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.45■□□□□ 0.7
VAPAQ9P0L0 TPRG1LP1-201ENST00000598702 760 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms