Protein–RNA interactions for Protein: Q9NXX6

NSMCE4A, Non-structural maintenance of chromosomes element 4 homolog A, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4AQ9NXX6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NSMCE4AQ9NXX6 LINC02228-203ENST00000641970 1355 ntBASIC20.6■□□□□ 0.89
NSMCE4AQ9NXX6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.6■□□□□ 0.89
NSMCE4AQ9NXX6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NSMCE4AQ9NXX6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NSMCE4AQ9NXX6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NSMCE4AQ9NXX6 AC105265.2-201ENST00000467189 838 ntBASIC20.6■□□□□ 0.89
NSMCE4AQ9NXX6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.6■□□□□ 0.89
NSMCE4AQ9NXX6 AC005837.3-201ENST00000612163 286 ntBASIC20.6■□□□□ 0.89
NSMCE4AQ9NXX6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.6■□□□□ 0.89
NSMCE4AQ9NXX6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NSMCE4AQ9NXX6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NSMCE4AQ9NXX6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NSMCE4AQ9NXX6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NSMCE4AQ9NXX6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NSMCE4AQ9NXX6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NSMCE4AQ9NXX6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 DUX4L2-201ENST00000561772 1275 ntBASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 DUX4L6-201ENST00000626483 1275 ntBASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 DUX4L1-201ENST00000627662 1275 ntBASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 DUX4L8-201ENST00000629013 1275 ntBASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 DUX4L3-201ENST00000630187 1275 ntBASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 DUX4L7-201ENST00000630678 1275 ntBASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 DUX4L5-201ENST00000630834 1275 ntBASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.59■□□□□ 0.89
NSMCE4AQ9NXX6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NSMCE4AQ9NXX6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
NSMCE4AQ9NXX6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
NSMCE4AQ9NXX6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NSMCE4AQ9NXX6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.58■□□□□ 0.89
NSMCE4AQ9NXX6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NSMCE4AQ9NXX6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.58■□□□□ 0.89
NSMCE4AQ9NXX6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NSMCE4AQ9NXX6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
NSMCE4AQ9NXX6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NSMCE4AQ9NXX6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.58■□□□□ 0.89
NSMCE4AQ9NXX6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.58■□□□□ 0.89
NSMCE4AQ9NXX6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NSMCE4AQ9NXX6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
NSMCE4AQ9NXX6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
NSMCE4AQ9NXX6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NSMCE4AQ9NXX6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NSMCE4AQ9NXX6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.57■□□□□ 0.88
NSMCE4AQ9NXX6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NSMCE4AQ9NXX6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NSMCE4AQ9NXX6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NSMCE4AQ9NXX6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.56■□□□□ 0.88
NSMCE4AQ9NXX6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NSMCE4AQ9NXX6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NSMCE4AQ9NXX6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NSMCE4AQ9NXX6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.56■□□□□ 0.88
NSMCE4AQ9NXX6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NSMCE4AQ9NXX6 AC123595.1-201ENST00000440769 1046 ntBASIC20.56■□□□□ 0.88
NSMCE4AQ9NXX6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.56■□□□□ 0.88
NSMCE4AQ9NXX6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NSMCE4AQ9NXX6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NSMCE4AQ9NXX6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NSMCE4AQ9NXX6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NSMCE4AQ9NXX6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NSMCE4AQ9NXX6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.55■□□□□ 0.88
NSMCE4AQ9NXX6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NSMCE4AQ9NXX6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NSMCE4AQ9NXX6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms