Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 CYP2T1P-201ENST00000432607 1285 ntBASIC25.17■■□□□ 1.62
ECHDC1Q9NTX5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.17■■□□□ 1.62
ECHDC1Q9NTX5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.17■■□□□ 1.62
ECHDC1Q9NTX5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.17■■□□□ 1.62
ECHDC1Q9NTX5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC25.17■■□□□ 1.62
ECHDC1Q9NTX5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ECHDC1Q9NTX5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ECHDC1Q9NTX5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ECHDC1Q9NTX5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ECHDC1Q9NTX5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.17■■□□□ 1.62
ECHDC1Q9NTX5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC25.17■■□□□ 1.62
ECHDC1Q9NTX5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
ECHDC1Q9NTX5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC25.17■■□□□ 1.62
ECHDC1Q9NTX5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC25.17■■□□□ 1.62
ECHDC1Q9NTX5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 AC005181.1-201ENST00000604782 1256 ntBASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC25.16■■□□□ 1.62
ECHDC1Q9NTX5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
ECHDC1Q9NTX5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ECHDC1Q9NTX5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ECHDC1Q9NTX5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC25.15■■□□□ 1.62
ECHDC1Q9NTX5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ECHDC1Q9NTX5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
ECHDC1Q9NTX5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ECHDC1Q9NTX5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.15■■□□□ 1.62
ECHDC1Q9NTX5 RARRES2P4-201ENST00000514074 484 ntBASIC25.15■■□□□ 1.62
ECHDC1Q9NTX5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC25.15■■□□□ 1.62
ECHDC1Q9NTX5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25.15■■□□□ 1.62
ECHDC1Q9NTX5 AC027702.1-201ENST00000563810 1770 ntBASIC25.15■■□□□ 1.62
ECHDC1Q9NTX5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ECHDC1Q9NTX5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
ECHDC1Q9NTX5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ECHDC1Q9NTX5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ECHDC1Q9NTX5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
ECHDC1Q9NTX5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ECHDC1Q9NTX5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.62
ECHDC1Q9NTX5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
ECHDC1Q9NTX5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ECHDC1Q9NTX5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ECHDC1Q9NTX5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
ECHDC1Q9NTX5 CROCCP5-201ENST00000436658 830 ntBASIC25.14■■□□□ 1.62
ECHDC1Q9NTX5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ECHDC1Q9NTX5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC25.14■■□□□ 1.62
ECHDC1Q9NTX5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ECHDC1Q9NTX5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.61
ECHDC1Q9NTX5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC25.14■■□□□ 1.61
ECHDC1Q9NTX5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ECHDC1Q9NTX5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC25.13■■□□□ 1.61
ECHDC1Q9NTX5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ECHDC1Q9NTX5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC25.13■■□□□ 1.61
ECHDC1Q9NTX5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC25.13■■□□□ 1.61
ECHDC1Q9NTX5 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ECHDC1Q9NTX5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC25.13■■□□□ 1.61
ECHDC1Q9NTX5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC25.13■■□□□ 1.61
ECHDC1Q9NTX5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
ECHDC1Q9NTX5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.13■■□□□ 1.61
ECHDC1Q9NTX5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.13■■□□□ 1.61
ECHDC1Q9NTX5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
ECHDC1Q9NTX5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
ECHDC1Q9NTX5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
ECHDC1Q9NTX5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ECHDC1Q9NTX5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
ECHDC1Q9NTX5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ECHDC1Q9NTX5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ECHDC1Q9NTX5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
ECHDC1Q9NTX5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC25.12■■□□□ 1.61
ECHDC1Q9NTX5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC25.12■■□□□ 1.61
ECHDC1Q9NTX5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
ECHDC1Q9NTX5 AL050303.2-201ENST00000619798 666 ntBASIC25.12■■□□□ 1.61
ECHDC1Q9NTX5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ECHDC1Q9NTX5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ECHDC1Q9NTX5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ECHDC1Q9NTX5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC25.12■■□□□ 1.61
ECHDC1Q9NTX5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ECHDC1Q9NTX5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC25.12■■□□□ 1.61
ECHDC1Q9NTX5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ECHDC1Q9NTX5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25.12■■□□□ 1.61
ECHDC1Q9NTX5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.11■■□□□ 1.61
ECHDC1Q9NTX5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
ECHDC1Q9NTX5 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC25.11■■□□□ 1.61
ECHDC1Q9NTX5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ECHDC1Q9NTX5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms