Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 ARMC10P1-201ENST00000313754 855 ntBASIC23.76■■□□□ 1.39
ZFYVE28Q9HCC9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ZFYVE28Q9HCC9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ZFYVE28Q9HCC9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZFYVE28Q9HCC9 RN7SL850P-201ENST00000579959 291 ntBASIC23.76■■□□□ 1.39
ZFYVE28Q9HCC9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
ZFYVE28Q9HCC9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.76■■□□□ 1.39
ZFYVE28Q9HCC9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZFYVE28Q9HCC9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ZFYVE28Q9HCC9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.75■■□□□ 1.39
ZFYVE28Q9HCC9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
ZFYVE28Q9HCC9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZFYVE28Q9HCC9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZFYVE28Q9HCC9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ZFYVE28Q9HCC9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ZFYVE28Q9HCC9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZFYVE28Q9HCC9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
ZFYVE28Q9HCC9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.75■■□□□ 1.39
ZFYVE28Q9HCC9 AL353708.3-201ENST00000610272 989 ntBASIC23.75■■□□□ 1.39
ZFYVE28Q9HCC9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
ZFYVE28Q9HCC9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
ZFYVE28Q9HCC9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZFYVE28Q9HCC9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ZFYVE28Q9HCC9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZFYVE28Q9HCC9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
ZFYVE28Q9HCC9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZFYVE28Q9HCC9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZFYVE28Q9HCC9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.74■■□□□ 1.39
ZFYVE28Q9HCC9 AC116050.2-201ENST00000612102 1779 ntBASIC23.74■■□□□ 1.39
ZFYVE28Q9HCC9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.74■■□□□ 1.39
ZFYVE28Q9HCC9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.74■■□□□ 1.39
ZFYVE28Q9HCC9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
ZFYVE28Q9HCC9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.74■■□□□ 1.39
ZFYVE28Q9HCC9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.74■■□□□ 1.39
ZFYVE28Q9HCC9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.74■■□□□ 1.39
ZFYVE28Q9HCC9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZFYVE28Q9HCC9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
ZFYVE28Q9HCC9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.74■■□□□ 1.39
ZFYVE28Q9HCC9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZFYVE28Q9HCC9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZFYVE28Q9HCC9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
ZFYVE28Q9HCC9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ZFYVE28Q9HCC9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZFYVE28Q9HCC9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.73■■□□□ 1.39
ZFYVE28Q9HCC9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZFYVE28Q9HCC9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZFYVE28Q9HCC9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ZFYVE28Q9HCC9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
ZFYVE28Q9HCC9 AL390719.1-204ENST00000412397 1219 ntBASIC23.73■■□□□ 1.39
ZFYVE28Q9HCC9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ZFYVE28Q9HCC9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ZFYVE28Q9HCC9 AC026471.5-201ENST00000615068 467 ntBASIC23.73■■□□□ 1.39
ZFYVE28Q9HCC9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.73■■□□□ 1.39
ZFYVE28Q9HCC9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZFYVE28Q9HCC9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZFYVE28Q9HCC9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZFYVE28Q9HCC9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZFYVE28Q9HCC9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZFYVE28Q9HCC9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ZFYVE28Q9HCC9 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZFYVE28Q9HCC9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.72■■□□□ 1.39
ZFYVE28Q9HCC9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ZFYVE28Q9HCC9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
ZFYVE28Q9HCC9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC23.72■■□□□ 1.39
ZFYVE28Q9HCC9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.72■■□□□ 1.39
ZFYVE28Q9HCC9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.72■■□□□ 1.39
ZFYVE28Q9HCC9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.72■■□□□ 1.39
ZFYVE28Q9HCC9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZFYVE28Q9HCC9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.72■■□□□ 1.39
ZFYVE28Q9HCC9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZFYVE28Q9HCC9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.71■■□□□ 1.39
ZFYVE28Q9HCC9 MMP23A-201ENST00000234610 1017 ntBASIC23.71■■□□□ 1.39
ZFYVE28Q9HCC9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ZFYVE28Q9HCC9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZFYVE28Q9HCC9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZFYVE28Q9HCC9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZFYVE28Q9HCC9 AC093323.1-202ENST00000635031 2045 ntBASIC23.71■■□□□ 1.39
ZFYVE28Q9HCC9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.7■■□□□ 1.39
ZFYVE28Q9HCC9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
ZFYVE28Q9HCC9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
ZFYVE28Q9HCC9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
ZFYVE28Q9HCC9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
ZFYVE28Q9HCC9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
ZFYVE28Q9HCC9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
ZFYVE28Q9HCC9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
ZFYVE28Q9HCC9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
ZFYVE28Q9HCC9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
ZFYVE28Q9HCC9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 AP003071.4-201ENST00000562276 1284 ntBASIC23.7■■□□□ 1.38
ZFYVE28Q9HCC9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms