Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRTM1Q9HBL6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.81■□□□□ 0.76
LRTM1Q9HBL6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRTM1Q9HBL6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.81■□□□□ 0.76
LRTM1Q9HBL6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.81■□□□□ 0.76
LRTM1Q9HBL6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
LRTM1Q9HBL6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.81■□□□□ 0.76
LRTM1Q9HBL6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRTM1Q9HBL6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
LRTM1Q9HBL6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRTM1Q9HBL6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
LRTM1Q9HBL6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRTM1Q9HBL6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRTM1Q9HBL6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LRTM1Q9HBL6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LRTM1Q9HBL6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.8■□□□□ 0.76
LRTM1Q9HBL6 KRT16P2-201ENST00000414673 1423 ntBASIC19.8■□□□□ 0.76
LRTM1Q9HBL6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.8■□□□□ 0.76
LRTM1Q9HBL6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRTM1Q9HBL6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
LRTM1Q9HBL6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.8■□□□□ 0.76
LRTM1Q9HBL6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRTM1Q9HBL6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.8■□□□□ 0.76
LRTM1Q9HBL6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRTM1Q9HBL6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRTM1Q9HBL6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRTM1Q9HBL6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 AC120498.10-201ENST00000621827 505 ntBASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 RARRES2P11-201ENST00000635158 484 ntBASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 LINC02228-203ENST00000641970 1355 ntBASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
LRTM1Q9HBL6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRTM1Q9HBL6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LRTM1Q9HBL6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRTM1Q9HBL6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRTM1Q9HBL6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRTM1Q9HBL6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.78■□□□□ 0.76
LRTM1Q9HBL6 AC245052.3-201ENST00000450182 901 ntBASIC19.78■□□□□ 0.76
LRTM1Q9HBL6 AC010141.2-201ENST00000452426 721 ntBASIC19.78■□□□□ 0.76
LRTM1Q9HBL6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRTM1Q9HBL6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRTM1Q9HBL6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRTM1Q9HBL6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.78■□□□□ 0.76
LRTM1Q9HBL6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LRTM1Q9HBL6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.76■□□□□ 0.75
LRTM1Q9HBL6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms