Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 EEF1DP3-203ENST00000566025 782 ntBASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 AL034346.1-201ENST00000568244 1277 ntBASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 AC053503.5-201ENST00000601508 636 ntBASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 AP006294.2-201ENST00000641667 209 ntBASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1BQ9H9Y6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.3■□□□□ 0.84
POLR1BQ9H9Y6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1BQ9H9Y6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1BQ9H9Y6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1BQ9H9Y6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1BQ9H9Y6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1BQ9H9Y6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.3■□□□□ 0.84
POLR1BQ9H9Y6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
POLR1BQ9H9Y6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.3■□□□□ 0.84
POLR1BQ9H9Y6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.3■□□□□ 0.84
POLR1BQ9H9Y6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1BQ9H9Y6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1BQ9H9Y6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1BQ9H9Y6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1BQ9H9Y6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
POLR1BQ9H9Y6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1BQ9H9Y6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1BQ9H9Y6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 AC093787.1-201ENST00000450396 207 ntBASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 RARRES2P4-201ENST00000514074 484 ntBASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 AC016405.3-201ENST00000607710 860 ntBASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1BQ9H9Y6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 LINC01960-201ENST00000563759 1884 ntBASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 BX276092.2-201ENST00000417668 665 ntBASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 RPS2P52-201ENST00000469610 820 ntBASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.28■□□□□ 0.84
POLR1BQ9H9Y6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms