Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 UBE2SP1-201ENST00000450587 669 ntBASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 AC008550.1-201ENST00000511500 884 ntBASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 C1QBPP2-201ENST00000528754 825 ntBASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RPAP3Q9H6T3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 AC087633.2-202ENST00000565166 1439 ntBASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 RPPH1-201ENST00000516869 333 ntBASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 C2orf69P4-201ENST00000565394 541 ntBASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.85■■□□□ 1.41
RPAP3Q9H6T3 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.84■■□□□ 1.41
RPAP3Q9H6T3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.83■■□□□ 1.41
RPAP3Q9H6T3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPAP3Q9H6T3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RPAP3Q9H6T3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
RPAP3Q9H6T3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.83■■□□□ 1.41
RPAP3Q9H6T3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPAP3Q9H6T3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.83■■□□□ 1.41
RPAP3Q9H6T3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RPAP3Q9H6T3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.83■■□□□ 1.41
RPAP3Q9H6T3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.83■■□□□ 1.41
RPAP3Q9H6T3 RN7SL471P-201ENST00000580476 299 ntBASIC23.83■■□□□ 1.41
RPAP3Q9H6T3 FAM197Y4-202ENST00000622692 608 ntBASIC23.83■■□□□ 1.41
RPAP3Q9H6T3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
RPAP3Q9H6T3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RPAP3Q9H6T3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RPAP3Q9H6T3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RPAP3Q9H6T3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RPAP3Q9H6T3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP3Q9H6T3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.82■■□□□ 1.4
RPAP3Q9H6T3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RPAP3Q9H6T3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP3Q9H6T3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP3Q9H6T3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.82■■□□□ 1.4
RPAP3Q9H6T3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.82■■□□□ 1.4
RPAP3Q9H6T3 AC069544.1-201ENST00000609399 999 ntBASIC23.82■■□□□ 1.4
RPAP3Q9H6T3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.82■■□□□ 1.4
RPAP3Q9H6T3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP3Q9H6T3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP3Q9H6T3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP3Q9H6T3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP3Q9H6T3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RPAP3Q9H6T3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP3Q9H6T3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP3Q9H6T3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.81■■□□□ 1.4
RPAP3Q9H6T3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
RPAP3Q9H6T3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP3Q9H6T3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
RPAP3Q9H6T3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP3Q9H6T3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.81■■□□□ 1.4
RPAP3Q9H6T3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.81■■□□□ 1.4
RPAP3Q9H6T3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.81■■□□□ 1.4
RPAP3Q9H6T3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms