Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN3Q9H347 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN3Q9H347 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN3Q9H347 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
UBQLN3Q9H347 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
UBQLN3Q9H347 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.09■□□□□ 0.65
UBQLN3Q9H347 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.09■□□□□ 0.65
UBQLN3Q9H347 CNN2P6-201ENST00000439038 900 ntBASIC19.09■□□□□ 0.65
UBQLN3Q9H347 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN3Q9H347 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.09■□□□□ 0.65
UBQLN3Q9H347 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.09■□□□□ 0.65
UBQLN3Q9H347 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.09■□□□□ 0.65
UBQLN3Q9H347 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN3Q9H347 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.09■□□□□ 0.65
UBQLN3Q9H347 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBQLN3Q9H347 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBQLN3Q9H347 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBQLN3Q9H347 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.08■□□□□ 0.65
UBQLN3Q9H347 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.08■□□□□ 0.65
UBQLN3Q9H347 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
UBQLN3Q9H347 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN3Q9H347 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 ID1-201ENST00000376105 1233 ntBASIC19.07■□□□□ 0.64
UBQLN3Q9H347 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.07■□□□□ 0.64
UBQLN3Q9H347 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
UBQLN3Q9H347 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 MIR663A-201ENST00000385250 93 ntBASIC19.06■□□□□ 0.64
UBQLN3Q9H347 AC007322.1-201ENST00000426983 750 ntBASIC19.06■□□□□ 0.64
UBQLN3Q9H347 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 TERF1P5-201ENST00000477545 1207 ntBASIC19.06■□□□□ 0.64
UBQLN3Q9H347 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN3Q9H347 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 AC006970.2-201ENST00000450065 779 ntBASIC19.05■□□□□ 0.64
UBQLN3Q9H347 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN3Q9H347 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms