Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.92■□□□□ 0.94
POLR1EQ9GZS1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.92■□□□□ 0.94
POLR1EQ9GZS1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1EQ9GZS1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
POLR1EQ9GZS1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1EQ9GZS1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1EQ9GZS1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1EQ9GZS1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.92■□□□□ 0.94
POLR1EQ9GZS1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
POLR1EQ9GZS1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.92■□□□□ 0.94
POLR1EQ9GZS1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR1EQ9GZS1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1EQ9GZS1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1EQ9GZS1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1EQ9GZS1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.91■□□□□ 0.94
POLR1EQ9GZS1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
POLR1EQ9GZS1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1EQ9GZS1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.91■□□□□ 0.94
POLR1EQ9GZS1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
POLR1EQ9GZS1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.91■□□□□ 0.94
POLR1EQ9GZS1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.91■□□□□ 0.94
POLR1EQ9GZS1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
POLR1EQ9GZS1 AC068338.2-201ENST00000563278 1430 ntBASIC20.91■□□□□ 0.94
POLR1EQ9GZS1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.91■□□□□ 0.94
POLR1EQ9GZS1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.91■□□□□ 0.94
POLR1EQ9GZS1 FAM21FP-204ENST00000608637 956 ntBASIC20.91■□□□□ 0.94
POLR1EQ9GZS1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.91■□□□□ 0.94
POLR1EQ9GZS1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.91■□□□□ 0.94
POLR1EQ9GZS1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1EQ9GZS1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.9■□□□□ 0.94
POLR1EQ9GZS1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.9■□□□□ 0.94
POLR1EQ9GZS1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
POLR1EQ9GZS1 CDCA4P2-201ENST00000441182 718 ntBASIC20.9■□□□□ 0.94
POLR1EQ9GZS1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.9■□□□□ 0.94
POLR1EQ9GZS1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.9■□□□□ 0.94
POLR1EQ9GZS1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.9■□□□□ 0.94
POLR1EQ9GZS1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
POLR1EQ9GZS1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1EQ9GZS1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1EQ9GZS1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
POLR1EQ9GZS1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
POLR1EQ9GZS1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
POLR1EQ9GZS1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.89■□□□□ 0.93
POLR1EQ9GZS1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
POLR1EQ9GZS1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR1EQ9GZS1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.89■□□□□ 0.93
POLR1EQ9GZS1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
POLR1EQ9GZS1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.89■□□□□ 0.93
POLR1EQ9GZS1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR1EQ9GZS1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.89■□□□□ 0.93
POLR1EQ9GZS1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.89■□□□□ 0.93
POLR1EQ9GZS1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR1EQ9GZS1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR1EQ9GZS1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
POLR1EQ9GZS1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 AC026185.1-201ENST00000445748 174 ntBASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.88■□□□□ 0.93
POLR1EQ9GZS1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 CYP2T1P-201ENST00000432607 1285 ntBASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 AC016405.3-201ENST00000607710 860 ntBASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1EQ9GZS1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1EQ9GZS1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1EQ9GZS1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
POLR1EQ9GZS1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms