Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM2Q9C040 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM2Q9C040 CCDC92B-201ENST00000575506 885 ntBASIC18.94■□□□□ 0.62
TRIM2Q9C040 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM2Q9C040 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.94■□□□□ 0.62
TRIM2Q9C040 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM2Q9C040 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM2Q9C040 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM2Q9C040 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM2Q9C040 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM2Q9C040 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRIM2Q9C040 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM2Q9C040 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM2Q9C040 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM2Q9C040 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM2Q9C040 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM2Q9C040 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM2Q9C040 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM2Q9C040 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM2Q9C040 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM2Q9C040 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM2Q9C040 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM2Q9C040 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM2Q9C040 AC245052.3-201ENST00000450182 901 ntBASIC18.93■□□□□ 0.62
TRIM2Q9C040 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM2Q9C040 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.93■□□□□ 0.62
TRIM2Q9C040 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRIM2Q9C040 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRIM2Q9C040 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM2Q9C040 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM2Q9C040 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM2Q9C040 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM2Q9C040 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM2Q9C040 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM2Q9C040 AL157384.1-201ENST00000445995 2473 ntBASIC18.92■□□□□ 0.62
TRIM2Q9C040 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM2Q9C040 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM2Q9C040 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM2Q9C040 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM2Q9C040 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM2Q9C040 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM2Q9C040 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM2Q9C040 AC104187.1-201ENST00000607510 612 ntBASIC18.92■□□□□ 0.62
TRIM2Q9C040 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM2Q9C040 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRIM2Q9C040 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM2Q9C040 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM2Q9C040 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM2Q9C040 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM2Q9C040 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM2Q9C040 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM2Q9C040 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM2Q9C040 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM2Q9C040 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.91■□□□□ 0.62
TRIM2Q9C040 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TRIM2Q9C040 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.91■□□□□ 0.62
TRIM2Q9C040 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM2Q9C040 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM2Q9C040 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM2Q9C040 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM2Q9C040 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM2Q9C040 AC022517.1-201ENST00000592429 346 ntBASIC18.91■□□□□ 0.62
TRIM2Q9C040 AP001160.3-201ENST00000601484 763 ntBASIC18.91■□□□□ 0.62
TRIM2Q9C040 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM2Q9C040 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TRIM2Q9C040 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM2Q9C040 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM2Q9C040 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM2Q9C040 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TRIM2Q9C040 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM2Q9C040 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM2Q9C040 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM2Q9C040 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM2Q9C040 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM2Q9C040 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM2Q9C040 AC007225.1-201ENST00000566331 1836 ntBASIC18.9■□□□□ 0.62
TRIM2Q9C040 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRIM2Q9C040 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRIM2Q9C040 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM2Q9C040 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM2Q9C040 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM2Q9C040 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.9■□□□□ 0.62
TRIM2Q9C040 KRT18P14-201ENST00000534205 1250 ntBASIC18.9■□□□□ 0.62
TRIM2Q9C040 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRIM2Q9C040 RARRES2P11-201ENST00000635158 484 ntBASIC18.9■□□□□ 0.62
TRIM2Q9C040 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRIM2Q9C040 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM2Q9C040 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM2Q9C040 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM2Q9C040 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM2Q9C040 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM2Q9C040 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM2Q9C040 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM2Q9C040 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM2Q9C040 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM2Q9C040 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM2Q9C040 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.89■□□□□ 0.62
TRIM2Q9C040 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM2Q9C040 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRIM2Q9C040 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms