Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
COL25A1Q9BXS0 AC061975.6-201ENST00000579045 1553 ntBASIC21.26■□□□□ 0.99
COL25A1Q9BXS0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
COL25A1Q9BXS0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.26■□□□□ 0.99
COL25A1Q9BXS0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL25A1Q9BXS0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL25A1Q9BXS0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 KRT8P45-201ENST00000414328 1447 ntBASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 TSPY21P-201ENST00000433481 731 ntBASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 TSPY23P-201ENST00000440136 739 ntBASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 AC116562.2-201ENST00000507042 360 ntBASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL25A1Q9BXS0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL25A1Q9BXS0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL25A1Q9BXS0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.24■□□□□ 0.99
COL25A1Q9BXS0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL25A1Q9BXS0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.24■□□□□ 0.99
COL25A1Q9BXS0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL25A1Q9BXS0 PGM5P4-201ENST00000421970 445 ntBASIC21.24■□□□□ 0.99
COL25A1Q9BXS0 AL845331.1-201ENST00000424978 1190 ntBASIC21.24■□□□□ 0.99
COL25A1Q9BXS0 AC092647.4-201ENST00000457211 535 ntBASIC21.24■□□□□ 0.99
COL25A1Q9BXS0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
COL25A1Q9BXS0 LINC00543-201ENST00000567234 1845 ntBASIC21.24■□□□□ 0.99
COL25A1Q9BXS0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL25A1Q9BXS0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL25A1Q9BXS0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL25A1Q9BXS0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
COL25A1Q9BXS0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL25A1Q9BXS0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL25A1Q9BXS0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL25A1Q9BXS0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL25A1Q9BXS0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.23■□□□□ 0.99
COL25A1Q9BXS0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.23■□□□□ 0.99
COL25A1Q9BXS0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.23■□□□□ 0.99
COL25A1Q9BXS0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.23■□□□□ 0.99
COL25A1Q9BXS0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL25A1Q9BXS0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
COL25A1Q9BXS0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL25A1Q9BXS0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL25A1Q9BXS0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL25A1Q9BXS0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.23■□□□□ 0.99
COL25A1Q9BXS0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL25A1Q9BXS0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
COL25A1Q9BXS0 AC139426.1-201ENST00000568218 2529 ntBASIC21.22■□□□□ 0.99
COL25A1Q9BXS0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
COL25A1Q9BXS0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL25A1Q9BXS0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL25A1Q9BXS0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.22■□□□□ 0.99
COL25A1Q9BXS0 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.22■□□□□ 0.99
COL25A1Q9BXS0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.22■□□□□ 0.99
COL25A1Q9BXS0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL25A1Q9BXS0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL25A1Q9BXS0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL25A1Q9BXS0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.22■□□□□ 0.99
COL25A1Q9BXS0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL25A1Q9BXS0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.21■□□□□ 0.99
COL25A1Q9BXS0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL25A1Q9BXS0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL25A1Q9BXS0 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.21■□□□□ 0.99
COL25A1Q9BXS0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL25A1Q9BXS0 TSPY5P-201ENST00000426936 936 ntBASIC21.21■□□□□ 0.99
COL25A1Q9BXS0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.21■□□□□ 0.99
COL25A1Q9BXS0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.21■□□□□ 0.99
COL25A1Q9BXS0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.21■□□□□ 0.99
COL25A1Q9BXS0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL25A1Q9BXS0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.21■□□□□ 0.99
COL25A1Q9BXS0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.21■□□□□ 0.99
COL25A1Q9BXS0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL25A1Q9BXS0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
COL25A1Q9BXS0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL25A1Q9BXS0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.21■□□□□ 0.99
COL25A1Q9BXS0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
COL25A1Q9BXS0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL25A1Q9BXS0 AC135731.1-201ENST00000569415 2548 ntBASIC21.2■□□□□ 0.98
COL25A1Q9BXS0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.2■□□□□ 0.98
COL25A1Q9BXS0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
COL25A1Q9BXS0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL25A1Q9BXS0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.2■□□□□ 0.98
COL25A1Q9BXS0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.2■□□□□ 0.98
COL25A1Q9BXS0 C2orf69P3-201ENST00000565542 1120 ntBASIC21.2■□□□□ 0.98
COL25A1Q9BXS0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL25A1Q9BXS0 AC116407.4-201ENST00000623319 1061 ntBASIC21.2■□□□□ 0.98
COL25A1Q9BXS0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL25A1Q9BXS0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
COL25A1Q9BXS0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL25A1Q9BXS0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms