Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF4Q9BUZ4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF4Q9BUZ4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF4Q9BUZ4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRAF4Q9BUZ4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF4Q9BUZ4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 CROCCP5-201ENST00000436658 830 ntBASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAF4Q9BUZ4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF4Q9BUZ4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF4Q9BUZ4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 AC055733.4-201ENST00000638462 1354 ntBASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 MFSD11-216ENST00000590393 1141 ntBASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 AC104771.1-201ENST00000603335 964 ntBASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF4Q9BUZ4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.33■□□□□ 0.53
TRAF4Q9BUZ4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.33■□□□□ 0.53
TRAF4Q9BUZ4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms