Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.32■□□□□ 0.52
USB1Q9BQ65 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USB1Q9BQ65 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USB1Q9BQ65 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USB1Q9BQ65 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USB1Q9BQ65 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
USB1Q9BQ65 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USB1Q9BQ65 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.32■□□□□ 0.52
USB1Q9BQ65 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.32■□□□□ 0.52
USB1Q9BQ65 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.32■□□□□ 0.52
USB1Q9BQ65 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
USB1Q9BQ65 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.32■□□□□ 0.52
USB1Q9BQ65 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.32■□□□□ 0.52
USB1Q9BQ65 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USB1Q9BQ65 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.32■□□□□ 0.52
USB1Q9BQ65 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USB1Q9BQ65 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USB1Q9BQ65 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USB1Q9BQ65 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
USB1Q9BQ65 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USB1Q9BQ65 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USB1Q9BQ65 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USB1Q9BQ65 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USB1Q9BQ65 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.31■□□□□ 0.52
USB1Q9BQ65 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USB1Q9BQ65 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.31■□□□□ 0.52
USB1Q9BQ65 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USB1Q9BQ65 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USB1Q9BQ65 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.31■□□□□ 0.52
USB1Q9BQ65 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.31■□□□□ 0.52
USB1Q9BQ65 AC245052.3-201ENST00000450182 901 ntBASIC18.31■□□□□ 0.52
USB1Q9BQ65 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
USB1Q9BQ65 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.31■□□□□ 0.52
USB1Q9BQ65 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.31■□□□□ 0.52
USB1Q9BQ65 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
USB1Q9BQ65 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.31■□□□□ 0.52
USB1Q9BQ65 PKD1P6-201ENST00000343738 4769 ntBASIC18.31■□□□□ 0.52
USB1Q9BQ65 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USB1Q9BQ65 AC068338.2-201ENST00000563278 1430 ntBASIC18.31■□□□□ 0.52
USB1Q9BQ65 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.3■□□□□ 0.52
USB1Q9BQ65 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USB1Q9BQ65 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.3■□□□□ 0.52
USB1Q9BQ65 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USB1Q9BQ65 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USB1Q9BQ65 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
USB1Q9BQ65 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
USB1Q9BQ65 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
USB1Q9BQ65 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.3■□□□□ 0.52
USB1Q9BQ65 TSPY6P-201ENST00000448518 926 ntBASIC18.3■□□□□ 0.52
USB1Q9BQ65 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.3■□□□□ 0.52
USB1Q9BQ65 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.3■□□□□ 0.52
USB1Q9BQ65 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USB1Q9BQ65 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USB1Q9BQ65 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.3■□□□□ 0.52
USB1Q9BQ65 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USB1Q9BQ65 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USB1Q9BQ65 FAM99A-202ENST00000538190 1989 ntBASIC18.3■□□□□ 0.52
USB1Q9BQ65 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USB1Q9BQ65 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
USB1Q9BQ65 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USB1Q9BQ65 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
USB1Q9BQ65 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
USB1Q9BQ65 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USB1Q9BQ65 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USB1Q9BQ65 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.29■□□□□ 0.52
USB1Q9BQ65 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.29■□□□□ 0.52
USB1Q9BQ65 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USB1Q9BQ65 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
USB1Q9BQ65 AC142086.2-201ENST00000569753 217 ntBASIC18.29■□□□□ 0.52
USB1Q9BQ65 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
USB1Q9BQ65 AL050303.2-201ENST00000619798 666 ntBASIC18.29■□□□□ 0.52
USB1Q9BQ65 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.29■□□□□ 0.52
USB1Q9BQ65 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.29■□□□□ 0.52
USB1Q9BQ65 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.29■□□□□ 0.52
USB1Q9BQ65 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USB1Q9BQ65 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USB1Q9BQ65 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USB1Q9BQ65 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
USB1Q9BQ65 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USB1Q9BQ65 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USB1Q9BQ65 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USB1Q9BQ65 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.28■□□□□ 0.52
USB1Q9BQ65 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
USB1Q9BQ65 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USB1Q9BQ65 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USB1Q9BQ65 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
USB1Q9BQ65 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
USB1Q9BQ65 C11orf96-202ENST00000528572 1834 ntBASIC18.28■□□□□ 0.52
USB1Q9BQ65 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USB1Q9BQ65 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USB1Q9BQ65 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USB1Q9BQ65 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USB1Q9BQ65 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USB1Q9BQ65 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USB1Q9BQ65 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USB1Q9BQ65 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.28■□□□□ 0.52
USB1Q9BQ65 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
USB1Q9BQ65 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USB1Q9BQ65 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USB1Q9BQ65 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms