Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CDCA3Q99618 KRASP1-201ENST00000407852 552 ntBASIC21.67■■□□□ 1.06
CDCA3Q99618 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.67■■□□□ 1.06
CDCA3Q99618 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA3Q99618 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.67■■□□□ 1.06
CDCA3Q99618 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CDCA3Q99618 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA3Q99618 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CDCA3Q99618 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.67■■□□□ 1.06
CDCA3Q99618 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.67■■□□□ 1.06
CDCA3Q99618 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA3Q99618 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
CDCA3Q99618 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA3Q99618 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA3Q99618 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA3Q99618 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.66■■□□□ 1.06
CDCA3Q99618 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA3Q99618 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA3Q99618 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.66■■□□□ 1.06
CDCA3Q99618 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA3Q99618 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA3Q99618 AL390719.1-204ENST00000412397 1219 ntBASIC21.66■■□□□ 1.06
CDCA3Q99618 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.66■■□□□ 1.06
CDCA3Q99618 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA3Q99618 PRKY-204ENST00000533551 1019 ntBASIC21.66■■□□□ 1.06
CDCA3Q99618 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.66■■□□□ 1.06
CDCA3Q99618 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.66■■□□□ 1.06
CDCA3Q99618 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.66■■□□□ 1.06
CDCA3Q99618 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA3Q99618 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA3Q99618 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CDCA3Q99618 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.66■■□□□ 1.06
CDCA3Q99618 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.65■■□□□ 1.06
CDCA3Q99618 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
CDCA3Q99618 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
CDCA3Q99618 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA3Q99618 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CDCA3Q99618 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.65■■□□□ 1.06
CDCA3Q99618 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.65■■□□□ 1.06
CDCA3Q99618 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CDCA3Q99618 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.65■■□□□ 1.06
CDCA3Q99618 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CDCA3Q99618 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CDCA3Q99618 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA3Q99618 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA3Q99618 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA3Q99618 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CDCA3Q99618 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDCA3Q99618 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CDCA3Q99618 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDCA3Q99618 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDCA3Q99618 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDCA3Q99618 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.64■■□□□ 1.05
CDCA3Q99618 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.64■■□□□ 1.05
CDCA3Q99618 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDCA3Q99618 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.64■■□□□ 1.05
CDCA3Q99618 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
CDCA3Q99618 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.64■■□□□ 1.05
CDCA3Q99618 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.64■■□□□ 1.05
CDCA3Q99618 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.64■■□□□ 1.05
CDCA3Q99618 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CDCA3Q99618 AC012306.2-201ENST00000609350 630 ntBASIC21.64■■□□□ 1.05
CDCA3Q99618 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDCA3Q99618 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.64■■□□□ 1.05
CDCA3Q99618 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA3Q99618 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA3Q99618 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.63■■□□□ 1.05
CDCA3Q99618 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CDCA3Q99618 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA3Q99618 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA3Q99618 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA3Q99618 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA3Q99618 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CDCA3Q99618 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.63■■□□□ 1.05
CDCA3Q99618 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.63■■□□□ 1.05
CDCA3Q99618 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.63■■□□□ 1.05
CDCA3Q99618 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.63■■□□□ 1.05
CDCA3Q99618 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.63■■□□□ 1.05
CDCA3Q99618 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.63■■□□□ 1.05
CDCA3Q99618 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.63■■□□□ 1.05
CDCA3Q99618 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CDCA3Q99618 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
CDCA3Q99618 AC006557.6-201ENST00000623071 864 ntBASIC21.63■■□□□ 1.05
CDCA3Q99618 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA3Q99618 AC127496.7-201ENST00000625110 1798 ntBASIC21.63■■□□□ 1.05
CDCA3Q99618 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA3Q99618 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.63■■□□□ 1.05
CDCA3Q99618 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.63■■□□□ 1.05
CDCA3Q99618 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA3Q99618 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA3Q99618 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.62■■□□□ 1.05
CDCA3Q99618 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CDCA3Q99618 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA3Q99618 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.62■■□□□ 1.05
CDCA3Q99618 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.62■■□□□ 1.05
CDCA3Q99618 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CDCA3Q99618 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.62■■□□□ 1.05
CDCA3Q99618 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDCA3Q99618 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.62■■□□□ 1.05
CDCA3Q99618 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms