Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.88■□□□□ 0.93
PHOX2BQ99453 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.88■□□□□ 0.93
PHOX2BQ99453 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PHOX2BQ99453 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHOX2BQ99453 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PHOX2BQ99453 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHOX2BQ99453 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHOX2BQ99453 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHOX2BQ99453 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHOX2BQ99453 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PHOX2BQ99453 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PHOX2BQ99453 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.87■□□□□ 0.93
PHOX2BQ99453 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PHOX2BQ99453 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PHOX2BQ99453 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.87■□□□□ 0.93
PHOX2BQ99453 AC113347.1-201ENST00000413321 391 ntBASIC20.87■□□□□ 0.93
PHOX2BQ99453 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
PHOX2BQ99453 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.87■□□□□ 0.93
PHOX2BQ99453 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.87■□□□□ 0.93
PHOX2BQ99453 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.87■□□□□ 0.93
PHOX2BQ99453 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PHOX2BQ99453 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.87■□□□□ 0.93
PHOX2BQ99453 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.87■□□□□ 0.93
PHOX2BQ99453 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.87■□□□□ 0.93
PHOX2BQ99453 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.87■□□□□ 0.93
PHOX2BQ99453 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.87■□□□□ 0.93
PHOX2BQ99453 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHOX2BQ99453 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHOX2BQ99453 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.86■□□□□ 0.93
PHOX2BQ99453 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHOX2BQ99453 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PHOX2BQ99453 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PHOX2BQ99453 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
PHOX2BQ99453 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PHOX2BQ99453 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHOX2BQ99453 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PHOX2BQ99453 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHOX2BQ99453 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.86■□□□□ 0.93
PHOX2BQ99453 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.86■□□□□ 0.93
PHOX2BQ99453 AC104076.2-201ENST00000448912 469 ntBASIC20.86■□□□□ 0.93
PHOX2BQ99453 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.86■□□□□ 0.93
PHOX2BQ99453 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.86■□□□□ 0.93
PHOX2BQ99453 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PHOX2BQ99453 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.86■□□□□ 0.93
PHOX2BQ99453 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.86■□□□□ 0.93
PHOX2BQ99453 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.86■□□□□ 0.93
PHOX2BQ99453 AC110285.5-201ENST00000611501 352 ntBASIC20.86■□□□□ 0.93
PHOX2BQ99453 AC008175.2-201ENST00000612840 297 ntBASIC20.86■□□□□ 0.93
PHOX2BQ99453 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.86■□□□□ 0.93
PHOX2BQ99453 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PHOX2BQ99453 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PHOX2BQ99453 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PHOX2BQ99453 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHOX2BQ99453 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PHOX2BQ99453 AL353803.4-201ENST00000565882 1934 ntBASIC20.86■□□□□ 0.93
PHOX2BQ99453 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PHOX2BQ99453 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PHOX2BQ99453 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHOX2BQ99453 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHOX2BQ99453 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHOX2BQ99453 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PHOX2BQ99453 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PHOX2BQ99453 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.85■□□□□ 0.93
PHOX2BQ99453 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHOX2BQ99453 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
PHOX2BQ99453 KRT18P56-201ENST00000507275 550 ntBASIC20.85■□□□□ 0.93
PHOX2BQ99453 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.85■□□□□ 0.93
PHOX2BQ99453 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PHOX2BQ99453 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.85■□□□□ 0.93
PHOX2BQ99453 WWOX-216ENST00000569818 525 ntBASIC20.85■□□□□ 0.93
PHOX2BQ99453 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.85■□□□□ 0.93
PHOX2BQ99453 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.85■□□□□ 0.93
PHOX2BQ99453 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PHOX2BQ99453 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.85■□□□□ 0.93
PHOX2BQ99453 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHOX2BQ99453 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PHOX2BQ99453 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHOX2BQ99453 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.85■□□□□ 0.93
PHOX2BQ99453 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHOX2BQ99453 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHOX2BQ99453 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PHOX2BQ99453 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.84■□□□□ 0.93
PHOX2BQ99453 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.84■□□□□ 0.93
PHOX2BQ99453 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PHOX2BQ99453 KRASP1-201ENST00000407852 552 ntBASIC20.84■□□□□ 0.93
PHOX2BQ99453 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHOX2BQ99453 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PHOX2BQ99453 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHOX2BQ99453 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHOX2BQ99453 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHOX2BQ99453 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PHOX2BQ99453 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHOX2BQ99453 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.83■□□□□ 0.93
PHOX2BQ99453 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHOX2BQ99453 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PHOX2BQ99453 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHOX2BQ99453 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHOX2BQ99453 TERF1P1-201ENST00000311003 1181 ntBASIC20.83■□□□□ 0.93
PHOX2BQ99453 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHOX2BQ99453 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms