Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RAB40CQ96S21 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RAB40CQ96S21 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40CQ96S21 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40CQ96S21 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40CQ96S21 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40CQ96S21 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RAB40CQ96S21 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40CQ96S21 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40CQ96S21 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RAB40CQ96S21 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RAB40CQ96S21 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40CQ96S21 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB40CQ96S21 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40CQ96S21 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40CQ96S21 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40CQ96S21 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB40CQ96S21 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40CQ96S21 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RAB40CQ96S21 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40CQ96S21 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB40CQ96S21 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB40CQ96S21 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB40CQ96S21 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40CQ96S21 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40CQ96S21 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40CQ96S21 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB40CQ96S21 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RAB40CQ96S21 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40CQ96S21 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RAB40CQ96S21 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40CQ96S21 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB40CQ96S21 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB40CQ96S21 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RAB40CQ96S21 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40CQ96S21 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40CQ96S21 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40CQ96S21 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAB40CQ96S21 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB40CQ96S21 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAB40CQ96S21 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB40CQ96S21 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40CQ96S21 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40CQ96S21 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40CQ96S21 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40CQ96S21 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40CQ96S21 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RAB40CQ96S21 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB40CQ96S21 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40CQ96S21 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40CQ96S21 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RAB40CQ96S21 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40CQ96S21 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40CQ96S21 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RAB40CQ96S21 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40CQ96S21 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40CQ96S21 MIR3621-201ENST00000580529 85 ntBASIC16.66■□□□□ 0.26
RAB40CQ96S21 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB40CQ96S21 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB40CQ96S21 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40CQ96S21 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40CQ96S21 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40CQ96S21 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40CQ96S21 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40CQ96S21 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40CQ96S21 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40CQ96S21 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB40CQ96S21 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40CQ96S21 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40CQ96S21 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40CQ96S21 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40CQ96S21 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RAB40CQ96S21 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40CQ96S21 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40CQ96S21 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
RAB40CQ96S21 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB40CQ96S21 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB40CQ96S21 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40CQ96S21 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40CQ96S21 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40CQ96S21 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40CQ96S21 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.65■□□□□ 0.26
RAB40CQ96S21 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
RAB40CQ96S21 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40CQ96S21 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.65■□□□□ 0.26
RAB40CQ96S21 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40CQ96S21 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAB40CQ96S21 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40CQ96S21 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40CQ96S21 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40CQ96S21 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
RAB40CQ96S21 BX323043.1-201ENST00000641006 1765 ntBASIC16.64■□□□□ 0.25
RAB40CQ96S21 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40CQ96S21 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40CQ96S21 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40CQ96S21 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40CQ96S21 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
RAB40CQ96S21 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40CQ96S21 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40CQ96S21 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms