Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GAFA1Q96PS6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAFA1Q96PS6 AC005181.1-201ENST00000604782 1256 ntBASIC17.17■□□□□ 0.34
GAFA1Q96PS6 FAM21FP-204ENST00000608637 956 ntBASIC17.17■□□□□ 0.34
GAFA1Q96PS6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAFA1Q96PS6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAFA1Q96PS6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.17■□□□□ 0.34
GAFA1Q96PS6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.17■□□□□ 0.34
GAFA1Q96PS6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.17■□□□□ 0.34
GAFA1Q96PS6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAFA1Q96PS6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.16■□□□□ 0.34
GAFA1Q96PS6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GAFA1Q96PS6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
GAFA1Q96PS6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 MIR663A-201ENST00000385250 93 ntBASIC17.14■□□□□ 0.33
GAFA1Q96PS6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 RARRES2P4-201ENST00000514074 484 ntBASIC17.14■□□□□ 0.33
GAFA1Q96PS6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GAFA1Q96PS6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 CROCCP5-201ENST00000436658 830 ntBASIC17.13■□□□□ 0.33
GAFA1Q96PS6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 AC069236.1-201ENST00000604339 616 ntBASIC17.13■□□□□ 0.33
GAFA1Q96PS6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 AL050303.2-201ENST00000619798 666 ntBASIC17.13■□□□□ 0.33
GAFA1Q96PS6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms