Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.07■□□□□ 0.96
RTP4Q96DX8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.07■□□□□ 0.96
RTP4Q96DX8 KRT18P14-201ENST00000534205 1250 ntBASIC21.07■□□□□ 0.96
RTP4Q96DX8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.07■□□□□ 0.96
RTP4Q96DX8 AL137784.2-201ENST00000607332 1000 ntBASIC21.07■□□□□ 0.96
RTP4Q96DX8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RTP4Q96DX8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.07■□□□□ 0.96
RTP4Q96DX8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTP4Q96DX8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTP4Q96DX8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTP4Q96DX8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTP4Q96DX8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.07■□□□□ 0.96
RTP4Q96DX8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.07■□□□□ 0.96
RTP4Q96DX8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTP4Q96DX8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTP4Q96DX8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTP4Q96DX8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.06■□□□□ 0.96
RTP4Q96DX8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.06■□□□□ 0.96
RTP4Q96DX8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTP4Q96DX8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTP4Q96DX8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.06■□□□□ 0.96
RTP4Q96DX8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.06■□□□□ 0.96
RTP4Q96DX8 AC090192.1-201ENST00000517740 490 ntBASIC21.06■□□□□ 0.96
RTP4Q96DX8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTP4Q96DX8 SLC7A5P1-201ENST00000568957 537 ntBASIC21.06■□□□□ 0.96
RTP4Q96DX8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.06■□□□□ 0.96
RTP4Q96DX8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTP4Q96DX8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RTP4Q96DX8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTP4Q96DX8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.06■□□□□ 0.96
RTP4Q96DX8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTP4Q96DX8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTP4Q96DX8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTP4Q96DX8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTP4Q96DX8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.06■□□□□ 0.96
RTP4Q96DX8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.05■□□□□ 0.96
RTP4Q96DX8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.05■□□□□ 0.96
RTP4Q96DX8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTP4Q96DX8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTP4Q96DX8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.05■□□□□ 0.96
RTP4Q96DX8 AC004854.2-201ENST00000608450 1441 ntBASIC21.05■□□□□ 0.96
RTP4Q96DX8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTP4Q96DX8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RTP4Q96DX8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTP4Q96DX8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RTP4Q96DX8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
RTP4Q96DX8 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.05■□□□□ 0.96
RTP4Q96DX8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTP4Q96DX8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.05■□□□□ 0.96
RTP4Q96DX8 AC243732.1-201ENST00000612648 864 ntBASIC21.05■□□□□ 0.96
RTP4Q96DX8 AC092437.1-201ENST00000624794 1048 ntBASIC21.05■□□□□ 0.96
RTP4Q96DX8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.05■□□□□ 0.96
RTP4Q96DX8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTP4Q96DX8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTP4Q96DX8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTP4Q96DX8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTP4Q96DX8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTP4Q96DX8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTP4Q96DX8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTP4Q96DX8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTP4Q96DX8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTP4Q96DX8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTP4Q96DX8 AL121603.2-201ENST00000557373 2117 ntBASIC21.04■□□□□ 0.96
RTP4Q96DX8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
RTP4Q96DX8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.04■□□□□ 0.96
RTP4Q96DX8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.04■□□□□ 0.96
RTP4Q96DX8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RTP4Q96DX8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.04■□□□□ 0.96
RTP4Q96DX8 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.04■□□□□ 0.96
RTP4Q96DX8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTP4Q96DX8 AC116050.2-201ENST00000612102 1779 ntBASIC21.04■□□□□ 0.96
RTP4Q96DX8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.04■□□□□ 0.96
RTP4Q96DX8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTP4Q96DX8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTP4Q96DX8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTP4Q96DX8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTP4Q96DX8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTP4Q96DX8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTP4Q96DX8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTP4Q96DX8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RTP4Q96DX8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTP4Q96DX8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RTP4Q96DX8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.03■□□□□ 0.96
RTP4Q96DX8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTP4Q96DX8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.03■□□□□ 0.96
RTP4Q96DX8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.03■□□□□ 0.96
RTP4Q96DX8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.03■□□□□ 0.96
RTP4Q96DX8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.03■□□□□ 0.96
RTP4Q96DX8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTP4Q96DX8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.03■□□□□ 0.96
RTP4Q96DX8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.03■□□□□ 0.96
RTP4Q96DX8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RTP4Q96DX8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RTP4Q96DX8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RTP4Q96DX8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTP4Q96DX8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTP4Q96DX8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.02■□□□□ 0.96
RTP4Q96DX8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTP4Q96DX8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.02■□□□□ 0.96
RTP4Q96DX8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms