Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
SMARCC1Q92922 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
SMARCC1Q92922 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
SMARCC1Q92922 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SMARCC1Q92922 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC26.59■■□□□ 1.85
SMARCC1Q92922 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC26.59■■□□□ 1.85
SMARCC1Q92922 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC26.58■■□□□ 1.85
SMARCC1Q92922 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC26.58■■□□□ 1.85
SMARCC1Q92922 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SMARCC1Q92922 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
SMARCC1Q92922 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SMARCC1Q92922 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
SMARCC1Q92922 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC26.58■■□□□ 1.85
SMARCC1Q92922 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC26.58■■□□□ 1.85
SMARCC1Q92922 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC26.58■■□□□ 1.85
SMARCC1Q92922 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.58■■□□□ 1.85
SMARCC1Q92922 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SMARCC1Q92922 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SMARCC1Q92922 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SMARCC1Q92922 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SMARCC1Q92922 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC26.58■■□□□ 1.84
SMARCC1Q92922 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SMARCC1Q92922 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
SMARCC1Q92922 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
SMARCC1Q92922 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC26.57■■□□□ 1.84
SMARCC1Q92922 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.57■■□□□ 1.84
SMARCC1Q92922 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.57■■□□□ 1.84
SMARCC1Q92922 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SMARCC1Q92922 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.57■■□□□ 1.84
SMARCC1Q92922 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SMARCC1Q92922 AC127496.7-201ENST00000625110 1798 ntBASIC26.56■■□□□ 1.84
SMARCC1Q92922 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
SMARCC1Q92922 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC26.56■■□□□ 1.84
SMARCC1Q92922 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SMARCC1Q92922 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SMARCC1Q92922 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC26.56■■□□□ 1.84
SMARCC1Q92922 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SMARCC1Q92922 KRASP1-201ENST00000407852 552 ntBASIC26.56■■□□□ 1.84
SMARCC1Q92922 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SMARCC1Q92922 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SMARCC1Q92922 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SMARCC1Q92922 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SMARCC1Q92922 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SMARCC1Q92922 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC26.56■■□□□ 1.84
SMARCC1Q92922 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SMARCC1Q92922 AC113410.3-201ENST00000623366 203 ntBASIC26.56■■□□□ 1.84
SMARCC1Q92922 AC133561.5-201ENST00000635547 218 ntBASIC26.56■■□□□ 1.84
SMARCC1Q92922 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SMARCC1Q92922 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
SMARCC1Q92922 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SMARCC1Q92922 AC080038.3-201ENST00000623346 1952 ntBASIC26.55■■□□□ 1.84
SMARCC1Q92922 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.55■■□□□ 1.84
SMARCC1Q92922 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.55■■□□□ 1.84
SMARCC1Q92922 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SMARCC1Q92922 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC26.55■■□□□ 1.84
SMARCC1Q92922 AC087499.1-201ENST00000418141 1075 ntBASIC26.55■■□□□ 1.84
SMARCC1Q92922 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC26.55■■□□□ 1.84
SMARCC1Q92922 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC26.55■■□□□ 1.84
SMARCC1Q92922 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC26.55■■□□□ 1.84
SMARCC1Q92922 RARRES2P10-201ENST00000564312 460 ntBASIC26.55■■□□□ 1.84
SMARCC1Q92922 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC26.55■■□□□ 1.84
SMARCC1Q92922 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SMARCC1Q92922 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SMARCC1Q92922 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SMARCC1Q92922 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
SMARCC1Q92922 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SMARCC1Q92922 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
SMARCC1Q92922 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
SMARCC1Q92922 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
SMARCC1Q92922 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
SMARCC1Q92922 PGM5P4-201ENST00000421970 445 ntBASIC26.54■■□□□ 1.84
SMARCC1Q92922 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC26.54■■□□□ 1.84
SMARCC1Q92922 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC26.54■■□□□ 1.84
SMARCC1Q92922 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SMARCC1Q92922 MAX-217ENST00000557277 728 ntTSL 3 BASIC26.54■■□□□ 1.84
SMARCC1Q92922 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
SMARCC1Q92922 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SMARCC1Q92922 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
SMARCC1Q92922 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SMARCC1Q92922 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC26.54■■□□□ 1.84
SMARCC1Q92922 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SMARCC1Q92922 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC26.54■■□□□ 1.84
SMARCC1Q92922 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
SMARCC1Q92922 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SMARCC1Q92922 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SMARCC1Q92922 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SMARCC1Q92922 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
SMARCC1Q92922 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
SMARCC1Q92922 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
SMARCC1Q92922 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.53■■□□□ 1.84
SMARCC1Q92922 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SMARCC1Q92922 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
SMARCC1Q92922 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SMARCC1Q92922 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC26.53■■□□□ 1.84
SMARCC1Q92922 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC26.53■■□□□ 1.84
SMARCC1Q92922 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
SMARCC1Q92922 AC006557.6-201ENST00000623071 864 ntBASIC26.53■■□□□ 1.84
SMARCC1Q92922 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SMARCC1Q92922 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC26.53■■□□□ 1.84
SMARCC1Q92922 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms