Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SHC3Q92529 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.04■■□□□ 1.12
SHC3Q92529 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHC3Q92529 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHC3Q92529 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.03■■□□□ 1.12
SHC3Q92529 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHC3Q92529 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SHC3Q92529 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.03■■□□□ 1.12
SHC3Q92529 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHC3Q92529 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHC3Q92529 GABARAPL3-202ENST00000624044 1851 ntBASIC22.03■■□□□ 1.12
SHC3Q92529 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
SHC3Q92529 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHC3Q92529 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.03■■□□□ 1.12
SHC3Q92529 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.03■■□□□ 1.12
SHC3Q92529 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHC3Q92529 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.03■■□□□ 1.12
SHC3Q92529 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.03■■□□□ 1.12
SHC3Q92529 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SHC3Q92529 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.03■■□□□ 1.12
SHC3Q92529 AC010536.3-201ENST00000620306 533 ntBASIC22.03■■□□□ 1.12
SHC3Q92529 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
SHC3Q92529 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SHC3Q92529 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.03■■□□□ 1.12
SHC3Q92529 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.03■■□□□ 1.12
SHC3Q92529 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHC3Q92529 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHC3Q92529 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHC3Q92529 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHC3Q92529 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SHC3Q92529 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHC3Q92529 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHC3Q92529 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
SHC3Q92529 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SHC3Q92529 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHC3Q92529 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
SHC3Q92529 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
SHC3Q92529 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SHC3Q92529 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHC3Q92529 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SHC3Q92529 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.02■■□□□ 1.12
SHC3Q92529 KRT18P11-201ENST00000435214 1283 ntBASIC22.02■■□□□ 1.12
SHC3Q92529 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SHC3Q92529 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.02■■□□□ 1.12
SHC3Q92529 AL162430.1-201ENST00000480705 870 ntBASIC22.02■■□□□ 1.12
SHC3Q92529 AC137761.2-201ENST00000561729 223 ntBASIC22.02■■□□□ 1.12
SHC3Q92529 AC145350.3-201ENST00000569033 163 ntBASIC22.02■■□□□ 1.12
SHC3Q92529 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.02■■□□□ 1.12
SHC3Q92529 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.02■■□□□ 1.12
SHC3Q92529 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SHC3Q92529 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
SHC3Q92529 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SHC3Q92529 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
SHC3Q92529 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SHC3Q92529 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHC3Q92529 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHC3Q92529 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.01■■□□□ 1.11
SHC3Q92529 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SHC3Q92529 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHC3Q92529 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHC3Q92529 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHC3Q92529 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.01■■□□□ 1.11
SHC3Q92529 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.01■■□□□ 1.11
SHC3Q92529 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHC3Q92529 MIR5787-201ENST00000611784 55 ntBASIC22.01■■□□□ 1.11
SHC3Q92529 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHC3Q92529 AC092667.1-201ENST00000434301 2586 ntBASIC22.01■■□□□ 1.11
SHC3Q92529 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.01■■□□□ 1.11
SHC3Q92529 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.01■■□□□ 1.11
SHC3Q92529 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHC3Q92529 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHC3Q92529 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22■■□□□ 1.11
SHC3Q92529 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22■■□□□ 1.11
SHC3Q92529 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22■■□□□ 1.11
SHC3Q92529 AL121603.2-201ENST00000557373 2117 ntBASIC22■■□□□ 1.11
SHC3Q92529 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
SHC3Q92529 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
SHC3Q92529 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22■■□□□ 1.11
SHC3Q92529 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22■■□□□ 1.11
SHC3Q92529 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22■■□□□ 1.11
SHC3Q92529 SAPCD2P1-201ENST00000395413 1184 ntBASIC22■■□□□ 1.11
SHC3Q92529 AC007322.3-201ENST00000426526 701 ntBASIC22■■□□□ 1.11
SHC3Q92529 AC006015.1-201ENST00000429970 570 ntBASIC22■■□□□ 1.11
SHC3Q92529 GXYLT1P2-201ENST00000433312 1230 ntBASIC22■■□□□ 1.11
SHC3Q92529 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
SHC3Q92529 TERF1P5-201ENST00000477545 1207 ntBASIC22■■□□□ 1.11
SHC3Q92529 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
SHC3Q92529 MFSD11-216ENST00000590393 1141 ntBASIC22■■□□□ 1.11
SHC3Q92529 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHC3Q92529 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22■■□□□ 1.11
SHC3Q92529 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
SHC3Q92529 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHC3Q92529 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHC3Q92529 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22■■□□□ 1.11
SHC3Q92529 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHC3Q92529 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
SHC3Q92529 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22■■□□□ 1.11
SHC3Q92529 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHC3Q92529 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SHC3Q92529 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms