Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22■■□□□ 1.11
DDX1Q92499 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22■■□□□ 1.11
DDX1Q92499 RBM17P2-201ENST00000616397 1405 ntBASIC22■■□□□ 1.11
DDX1Q92499 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
DDX1Q92499 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22■■□□□ 1.11
DDX1Q92499 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22■■□□□ 1.11
DDX1Q92499 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
DDX1Q92499 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
DDX1Q92499 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
DDX1Q92499 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
DDX1Q92499 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.99■■□□□ 1.11
DDX1Q92499 NCF1B-203ENST00000435988 1254 ntBASIC21.99■■□□□ 1.11
DDX1Q92499 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.99■■□□□ 1.11
DDX1Q92499 UBE2DNL-204ENST00000602536 740 ntBASIC21.99■■□□□ 1.11
DDX1Q92499 AC243732.1-201ENST00000612648 864 ntBASIC21.99■■□□□ 1.11
DDX1Q92499 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.99■■□□□ 1.11
DDX1Q92499 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
DDX1Q92499 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.99■■□□□ 1.11
DDX1Q92499 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.99■■□□□ 1.11
DDX1Q92499 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX1Q92499 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
DDX1Q92499 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.99■■□□□ 1.11
DDX1Q92499 LINC01006-201ENST00000333319 2292 ntBASIC21.99■■□□□ 1.11
DDX1Q92499 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX1Q92499 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DDX1Q92499 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DDX1Q92499 AC073314.1-201ENST00000568729 2216 ntBASIC21.98■■□□□ 1.11
DDX1Q92499 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
DDX1Q92499 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX1Q92499 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.98■■□□□ 1.11
DDX1Q92499 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX1Q92499 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DDX1Q92499 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX1Q92499 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DDX1Q92499 AC091799.1-201ENST00000422823 811 ntBASIC21.98■■□□□ 1.11
DDX1Q92499 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.98■■□□□ 1.11
DDX1Q92499 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX1Q92499 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX1Q92499 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
DDX1Q92499 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.98■■□□□ 1.11
DDX1Q92499 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DDX1Q92499 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX1Q92499 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX1Q92499 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX1Q92499 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX1Q92499 AP005212.1-201ENST00000581547 1997 ntBASIC21.98■■□□□ 1.11
DDX1Q92499 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DDX1Q92499 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DDX1Q92499 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX1Q92499 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX1Q92499 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DDX1Q92499 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DDX1Q92499 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.97■■□□□ 1.11
DDX1Q92499 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
DDX1Q92499 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DDX1Q92499 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX1Q92499 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX1Q92499 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX1Q92499 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX1Q92499 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.96■■□□□ 1.11
DDX1Q92499 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX1Q92499 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX1Q92499 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX1Q92499 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX1Q92499 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.96■■□□□ 1.11
DDX1Q92499 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.96■■□□□ 1.11
DDX1Q92499 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX1Q92499 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX1Q92499 LINC01521-201ENST00000504184 1943 ntBASIC21.96■■□□□ 1.11
DDX1Q92499 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX1Q92499 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX1Q92499 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX1Q92499 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
DDX1Q92499 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX1Q92499 TSPY20P-201ENST00000450910 630 ntBASIC21.95■■□□□ 1.1
DDX1Q92499 AC092667.1-201ENST00000434301 2586 ntBASIC21.95■■□□□ 1.1
DDX1Q92499 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.95■■□□□ 1.1
DDX1Q92499 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX1Q92499 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.95■■□□□ 1.1
DDX1Q92499 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.95■■□□□ 1.1
DDX1Q92499 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.95■■□□□ 1.1
DDX1Q92499 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.95■■□□□ 1.1
DDX1Q92499 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
DDX1Q92499 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
DDX1Q92499 AC027702.1-201ENST00000563810 1770 ntBASIC21.94■■□□□ 1.1
DDX1Q92499 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.94■■□□□ 1.1
DDX1Q92499 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX1Q92499 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
DDX1Q92499 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX1Q92499 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
DDX1Q92499 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.94■■□□□ 1.1
DDX1Q92499 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
DDX1Q92499 GPX1P1-201ENST00000388829 606 ntBASIC21.94■■□□□ 1.1
DDX1Q92499 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
DDX1Q92499 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX1Q92499 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.94■■□□□ 1.1
DDX1Q92499 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.94■■□□□ 1.1
DDX1Q92499 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.94■■□□□ 1.1
DDX1Q92499 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX1Q92499 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms