Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 AP004607.4-201ENST00000530158 1459 ntBASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 AC126544.1-201ENST00000580842 1059 ntBASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RPS4Y2Q8TD47 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 AC106739.1-201ENST00000617035 715 ntBASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 AC105233.4-201ENST00000642045 216 ntBASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 AC061975.6-201ENST00000579045 1553 ntBASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.04■□□□□ 0.48
RPS4Y2Q8TD47 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 MIR638-201ENST00000385237 100 ntBASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 PCDHAC2-203ENST00000615316 3011 ntBASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 AC092720.2-201ENST00000602388 1665 ntBASIC18.03■□□□□ 0.48
RPS4Y2Q8TD47 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.02■□□□□ 0.48
RPS4Y2Q8TD47 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPS4Y2Q8TD47 AC019069.1-201ENST00000610008 1333 ntBASIC18.02■□□□□ 0.48
RPS4Y2Q8TD47 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.02■□□□□ 0.48
RPS4Y2Q8TD47 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
RPS4Y2Q8TD47 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPS4Y2Q8TD47 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RPS4Y2Q8TD47 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPS4Y2Q8TD47 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.02■□□□□ 0.48
RPS4Y2Q8TD47 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.02■□□□□ 0.48
RPS4Y2Q8TD47 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.02■□□□□ 0.48
RPS4Y2Q8TD47 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPS4Y2Q8TD47 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RPS4Y2Q8TD47 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RPS4Y2Q8TD47 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.02■□□□□ 0.47
RPS4Y2Q8TD47 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RPS4Y2Q8TD47 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.02■□□□□ 0.47
RPS4Y2Q8TD47 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RPS4Y2Q8TD47 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.02■□□□□ 0.47
RPS4Y2Q8TD47 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 AC024257.2-201ENST00000549699 147 ntBASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4Y2Q8TD47 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms