Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 DUX4L2-201ENST00000561772 1275 ntBASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 DUX4L6-201ENST00000626483 1275 ntBASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 DUX4L1-201ENST00000627662 1275 ntBASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 DUX4L8-201ENST00000629013 1275 ntBASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 DUX4L3-201ENST00000630187 1275 ntBASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 DUX4L7-201ENST00000630678 1275 ntBASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 DUX4L5-201ENST00000630834 1275 ntBASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 KRT16P2-201ENST00000414673 1423 ntBASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF439Q8NDP4 PLK5-205ENST00000642079 1969 ntBASIC17.02■□□□□ 0.32
ZNF439Q8NDP4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF439Q8NDP4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF439Q8NDP4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.02■□□□□ 0.32
ZNF439Q8NDP4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.02■□□□□ 0.32
ZNF439Q8NDP4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNF439Q8NDP4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.02■□□□□ 0.32
ZNF439Q8NDP4 AP001160.3-201ENST00000601484 763 ntBASIC17.02■□□□□ 0.32
ZNF439Q8NDP4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.02■□□□□ 0.32
ZNF439Q8NDP4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
ZNF439Q8NDP4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF439Q8NDP4 AC004854.2-201ENST00000608450 1441 ntBASIC17.02■□□□□ 0.31
ZNF439Q8NDP4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF439Q8NDP4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
ZNF439Q8NDP4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF439Q8NDP4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF439Q8NDP4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.02■□□□□ 0.31
ZNF439Q8NDP4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.02■□□□□ 0.31
ZNF439Q8NDP4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZNF439Q8NDP4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 AC006128.1-201ENST00000624704 1661 ntBASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ZNF439Q8NDP4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ZNF439Q8NDP4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17■□□□□ 0.31
ZNF439Q8NDP4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
ZNF439Q8NDP4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
ZNF439Q8NDP4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 TESC-206ENST00000541210 936 ntTSL 3 BASIC17■□□□□ 0.31
ZNF439Q8NDP4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17■□□□□ 0.31
ZNF439Q8NDP4 KRT18P61-201ENST00000585825 1298 ntBASIC17■□□□□ 0.31
ZNF439Q8NDP4 AC121338.2-201ENST00000622535 1744 ntBASIC17■□□□□ 0.31
ZNF439Q8NDP4 RARRES2P11-201ENST00000635158 484 ntBASIC17■□□□□ 0.31
ZNF439Q8NDP4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17■□□□□ 0.31
ZNF439Q8NDP4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNF439Q8NDP4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms