Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
PNMA1Q8ND90 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PNMA1Q8ND90 AL355472.2-201ENST00000422958 438 ntBASIC24.05■■□□□ 1.44
PNMA1Q8ND90 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.05■■□□□ 1.44
PNMA1Q8ND90 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PNMA1Q8ND90 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
PNMA1Q8ND90 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
PNMA1Q8ND90 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC24.05■■□□□ 1.44
PNMA1Q8ND90 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PNMA1Q8ND90 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PNMA1Q8ND90 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PNMA1Q8ND90 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
PNMA1Q8ND90 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC24.04■■□□□ 1.44
PNMA1Q8ND90 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC24.04■■□□□ 1.44
PNMA1Q8ND90 MCRIP2P1-201ENST00000394346 511 ntBASIC24.04■■□□□ 1.44
PNMA1Q8ND90 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.04■■□□□ 1.44
PNMA1Q8ND90 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.04■■□□□ 1.44
PNMA1Q8ND90 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.04■■□□□ 1.44
PNMA1Q8ND90 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.04■■□□□ 1.44
PNMA1Q8ND90 CYP21A1P-202ENST00000354927 1481 ntBASIC24.04■■□□□ 1.44
PNMA1Q8ND90 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PNMA1Q8ND90 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
PNMA1Q8ND90 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC24.04■■□□□ 1.44
PNMA1Q8ND90 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC24.04■■□□□ 1.44
PNMA1Q8ND90 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
PNMA1Q8ND90 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PNMA1Q8ND90 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC24.03■■□□□ 1.44
PNMA1Q8ND90 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
PNMA1Q8ND90 AC007375.3-201ENST00000600936 2314 ntBASIC24.03■■□□□ 1.44
PNMA1Q8ND90 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
PNMA1Q8ND90 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC24.03■■□□□ 1.44
PNMA1Q8ND90 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
PNMA1Q8ND90 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PNMA1Q8ND90 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24.03■■□□□ 1.44
PNMA1Q8ND90 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
PNMA1Q8ND90 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.03■■□□□ 1.44
PNMA1Q8ND90 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.03■■□□□ 1.44
PNMA1Q8ND90 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.03■■□□□ 1.44
PNMA1Q8ND90 CYP2T3P-201ENST00000601990 817 ntBASIC24.03■■□□□ 1.44
PNMA1Q8ND90 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
PNMA1Q8ND90 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PNMA1Q8ND90 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
PNMA1Q8ND90 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PNMA1Q8ND90 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
PNMA1Q8ND90 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC24.02■■□□□ 1.44
PNMA1Q8ND90 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.02■■□□□ 1.44
PNMA1Q8ND90 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
PNMA1Q8ND90 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC24.02■■□□□ 1.44
PNMA1Q8ND90 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.02■■□□□ 1.44
PNMA1Q8ND90 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC24.02■■□□□ 1.44
PNMA1Q8ND90 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PNMA1Q8ND90 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PNMA1Q8ND90 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PNMA1Q8ND90 AC069152.1-201ENST00000438030 544 ntBASIC24.02■■□□□ 1.44
PNMA1Q8ND90 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC24.02■■□□□ 1.44
PNMA1Q8ND90 MIR4758-201ENST00000577688 71 ntBASIC24.02■■□□□ 1.44
PNMA1Q8ND90 AC092118.2-201ENST00000613495 667 ntBASIC24.02■■□□□ 1.44
PNMA1Q8ND90 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PNMA1Q8ND90 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
PNMA1Q8ND90 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.02■■□□□ 1.44
PNMA1Q8ND90 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC24.01■■□□□ 1.43
PNMA1Q8ND90 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PNMA1Q8ND90 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
PNMA1Q8ND90 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PNMA1Q8ND90 KRT17P1-201ENST00000399211 1546 ntBASIC24.01■■□□□ 1.43
PNMA1Q8ND90 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
PNMA1Q8ND90 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PNMA1Q8ND90 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
PNMA1Q8ND90 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.01■■□□□ 1.43
PNMA1Q8ND90 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PNMA1Q8ND90 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PNMA1Q8ND90 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PNMA1Q8ND90 AC121338.2-201ENST00000622535 1744 ntBASIC24.01■■□□□ 1.43
PNMA1Q8ND90 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
PNMA1Q8ND90 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC24.01■■□□□ 1.43
PNMA1Q8ND90 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PNMA1Q8ND90 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC24.01■■□□□ 1.43
PNMA1Q8ND90 AC005229.4-201ENST00000610085 2198 ntBASIC24.01■■□□□ 1.43
PNMA1Q8ND90 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
PNMA1Q8ND90 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24■■□□□ 1.43
PNMA1Q8ND90 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC24■■□□□ 1.43
PNMA1Q8ND90 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC24■■□□□ 1.43
PNMA1Q8ND90 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PNMA1Q8ND90 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PNMA1Q8ND90 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24■■□□□ 1.43
PNMA1Q8ND90 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
PNMA1Q8ND90 PPP1R14BP2-201ENST00000426284 444 ntBASIC24■■□□□ 1.43
PNMA1Q8ND90 AC073210.2-201ENST00000430369 194 ntBASIC24■■□□□ 1.43
PNMA1Q8ND90 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
PNMA1Q8ND90 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC24■■□□□ 1.43
PNMA1Q8ND90 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PNMA1Q8ND90 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
PNMA1Q8ND90 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24■■□□□ 1.43
PNMA1Q8ND90 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24■■□□□ 1.43
PNMA1Q8ND90 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24■■□□□ 1.43
PNMA1Q8ND90 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24■■□□□ 1.43
PNMA1Q8ND90 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.99■■□□□ 1.43
PNMA1Q8ND90 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PNMA1Q8ND90 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PNMA1Q8ND90 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms